Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00629 ATGGAAGTTCTTCGAAGAAGATTTTCTCTCAACTTGAATCTTCTGTTTCTCCTCTGCGTCTTATTGGTTGTATTTCACATTGGTCCCATTGGAGCGGATGCATCCAATGCTTCTCTCGCTCAGAATGAGAAGCCTTTGCATCAATGTGTCCAATGTGGAAATGGAGAGGAGCAACGAATTGCAAATAGAATCAGCACCAATGAAGATGATAAGGATATTGACATAATTGCAGCCTATAGTGATCCTTCTGGGGCTTTTCGCCTTGGAAGGGTCAAATTGAAGGATTTATCTGCCTCCTGGGTATGGGAAAATTCTGTGGATGGAAACCACCACCAGCCACTGAGTTCCCAGACAGACCCATTAGTTTCCAGGACGGAGAATGAGGAGAAGGTGGAACGCTCCGTAGATGGCCAACCTCCTGCAGAAGGTGAAGCTGATTTTTCTCGTTTATCATCGATGAATCCAGTGAAGCTAAAACGGAGGGCAATGCGAATGGAGAGGAGGGCTCTACGAGCTGCGAATTTGATTAGAGAAGATAAAGAGGTAGACGATCAGATGGCAGCTGCTGCTATCGAACGGTCTAAAAGCTTTGACACTACAGTAAAGGGAAAGTACAGCATTTGGAGGAGAGATTTTGAAAACCCCAAATCTGATTCCACCTTGAAACTTATGCGCGATCAGATCATAATGGCCAAAGCATATGCAAATATAGCTAAGTCAAGGAATGATACCATACTTTACAATACTCTAATGAAACACTGTAGAGAAAGTCAACTGGCCATTGGGGAAGCAAATTCTGATGCTGGGCTTCATCCAAGTGCACTAGATCGAGCAAAAACCATGGGTCATGCTCTTGCGATGGCCAAAGACGAACTATATGACTGTCTGACTATGTCGAGAAAGTTGAGAACCATGCTACAGTCAACTGAGGATAATGTGAATGCCCAGAAGAAAAAGAGTGCATTCTTGACTCAGCTAGCAGCCAAAACAGTCCCTAAATCCTTGCACTGTCTCCCTTTACATCTTGCAGGAGACTATTTCCTGAAGGGTTACCATCTTAATCATAATATCGACAGAGAAAAGACCGAGAATCCTTCTCTGTATCACTATGCGATTTTCTCAGACAACGTGTTAGCAACATCGGTTGTCGTCAACTCTACTGTTTTGCATGCAAAGGAACCCGAGAAACACGTCTTCCATATCGTCACAGATAAGCTGAACTTTGCTGCTATGAGAATGTGGTTTCTTGTTAATTCTCCTTCGAAAGCAACGATCCAAGTTCAAAATATCGATGATTTCAAGTGGTTGAATTCCTCTTATTGCTCTGTTCTACGACAACTTGAATCTGCAAGACTTAAAGAGTATTACTTCAAGGCAAATCATCCTTCTTCCCTCTCTGTTGGTATGGATAATCTGAAGTATAGGAACCCCAAGTATTTGTCCATGCTGAATCATCTTCGATTCTACCTCCCCGAAGTGTATCCGAAGTTGGACAAGATCCTATTTTTAGACGACGATATTGTAGTTCAAAAGGATTTAACGCCGTTGTGGTCCATCGATCTGAAAGGTATGGTGAATGGGGCAGTGGAGACCTGTAAAGAAAGCTTTCATCGGTTCGATAAATATCTCAACTTCTCAAATCCAAAGATCTCTGAGAATTTTGATCCAAATGCTTGCGGTTGGGCGTTCGGCATGAATATTTTCGACTTGAAGGAATGGAGAAAACGAAACATGACTGGAATATACCATTATTGGCAAGATATGAACGAGGACCGAACTCTGTGGAAGCTCGGGTCGCTTCCACCAGGTCTGATCACATTTTACAATCTTACGTATCCGCTAGACAGAGGATGGCACGTGCTAGGTCTCGGATACGACCCTGCGCTGAACCTCACAGAAATAGAGAATGCTGCTGTTATCCATTACAATGGAAACTACAAGCCCTGGTTAGATTTAGCTGTTTCCAAGTACAAGTCATACTGGTCTAAGTATGTGATGCCTGGCAACCCTTATCTCCAGCTTTGTAACATCAGTGAATAG 2040 43.09 MEVLRRRFSLNLNLLFLLCVLLVVFHIGPIGADASNASLAQNEKPLHQCVQCGNGEEQRIANRISTNEDDKDIDIIAAYSDPSGAFRLGRVKLKDLSASWVWENSVDGNHHQPLSSQTDPLVSRTENEEKVERSVDGQPPAEGEADFSRLSSMNPVKLKRRAMRMERRALRAANLIREDKEVDDQMAAAAIERSKSFDTTVKGKYSIWRRDFENPKSDSTLKLMRDQIIMAKAYANIAKSRNDTILYNTLMKHCRESQLAIGEANSDAGLHPSALDRAKTMGHALAMAKDELYDCLTMSRKLRTMLQSTEDNVNAQKKKSAFLTQLAAKTVPKSLHCLPLHLAGDYFLKGYHLNHNIDREKTENPSLYHYAIFSDNVLATSVVVNSTVLHAKEPEKHVFHIVTDKLNFAAMRMWFLVNSPSKATIQVQNIDDFKWLNSSYCSVLRQLESARLKEYYFKANHPSSLSVGMDNLKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTPLWSIDLKGMVNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGWAFGMNIFDLKEWRKRNMTGIYHYWQDMNEDRTLWKLGSLPPGLITFYNLTYPLDRGWHVLGLGYDPALNLTEIENAAVIHYNGNYKPWLDLAVSKYKSYWSKYVMPGNPYLQLCNISE 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6518025 6522710 - Cp4.1LG04g04540.1 Cpe04g00629 468191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00629 679 Pfam Glycosyl transferase family 8 342 652 IPR002495 GO:0016757
Cpe04g00629 679 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 370 668 IPR029044 -
Cpe04g00629 679 SUPERFAMILY Nucleotide-diphospho-sugar transferases 368 665 IPR029044 -
Cpe04g00629 679 MobiDBLite consensus disorder prediction 107 151 - -
Cpe04g00629 679 CDD GT8_like_1 368 665 - -
Cpe04g00629 679 MobiDBLite consensus disorder prediction 107 122 - -
Cpe04g00629 679 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 20 679 IPR029993 GO:0047262
Cpe04g00629 679 MobiDBLite consensus disorder prediction 123 139 - -
Cpe04g00629 679 PANTHER GALACTURONOSYLTRANSFERASE 3-RELATED 20 679 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00629 Cpe16g00265 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00629 Cpe-Chr4:6518025 Cpe17g00326 Cpe-Chr17:2216654 8.72E-84 dispersed
Cpe04g00629 Cpe-Chr4:6518025 Cpe12g00001 Cpe-Chr12:41 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00629 K13648 - csv:101209082 1216.45