Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00678 ATGCTTCTTTCTCCGGGACACTCTCCCCGACATATCTCATCCCCCTCGCCGTCGACGGTTTCCGAGAATGCGATCCAAAATCTGCCGAGTTCGTCTTCGATTACGCCTCGGAGCTCTAGGAAACATCCCAAGGTTCTTGATGAGGATGCCTATGTAGAAGCGATAGAGAATATTATAGAGCGGGATTACTTTCCCGACATCTCGAAGCTCAGAGATCGTCTCGATTGGCTTGAAGCGATTAAAAGTGAAGACCCGATTCTAATTCGAGATGCGCAGTTGAAGATCATGGAGCGTCGTGGCCAGAAGGTTAAACGTTTGAACCCTGATGGTAAGTCCCAGACACCTGGTTCCACTTTTATGAGAAGTTTTACCTCTTTTGATGGATTTGAGGGTAAAACCCCGAAAACCCCCCTCTTTGGTAAAAGTGATATTGCCGGTGAAACGGAGGAGGGTGGTTGTGATGGTAAGGTGGTGGATGAATCGTTGTCGCTCGATGAGTTTTTTAGGCAATATACGAGCGAGGATAATTTTAGCTTTTCCAAAATTCTTGACAAAGATAATAGGAAGAGGAAGGAGAGATACGCATATTTGACGGAGGGTGAAAAGGAAGTTATGAAGTCAATTGAGGATGTAAAAAGAGATAGAATAACTGATGGTTATGGGACTTCCGATCAGCCGCCAAGTACCTTGGAAGGATGGAAGTATACTGCAAAAAATTTGTTGATGTATCATCCATCCGACAGAGGTGAGGCTCCACTGACAGAGGAAGAAATGGCTGTTAGATTGAAGGGCCTTACCAAGGAAATTAACCGAACTAGCACTCGGTTCCATGGTAAATTGATGGACTCAAGGCCAAAAGGCGATGGTACAGTTGAAGTGCTCTATACCCCTGTGGCTGGATCTACTCCATATCCTGTGTCTAATAGAGACGGCGATAGACTGAAGAAGTATGATTTGGAGGATTTAAGGAAGACCCCAAATCCATTTTATGTAGAATCAGGGAAAAAGGCTGAGAATGGCTACGGTTTTGTCCGAACGCCGTCCCCTGCTCCCGGTGTTGATGAATCTCCATTTATCACGTGGGGTGAGATTGAAGGAACACCCCTGAGACTTGATCCTGAGGAGACGCCTATTGACATTGGTGGTACAGTTGATGGGCCACGTTATAATATTCCTTGTCCACCTGCAAGAGATGAGAAGGCTCATTCACTTTCAAGGGAGGCTGCACGAAAGCTAAGGGAGAAATCAAAGATGTTTCAGAAGCCACCGTTGCCATCACCCGTTAGAGGGGGAAGTGCGAGCCCAAGTGTTCGAAGGACCCTCTCTCCAGCCGCCCAGAAGTTTGTAAGGAATGCAATAGCGAAGTCGACATCTTCATTTGATGAAACCCTTCGTGCCAGTTACAGAGGTCGAAGCCCGAGTTCAGCAACCCCTAAAAGCGGGAGGAGTTTGTCTAGATTTGCAAGAGATGGGAGCTTTGGATCTAGGTCACCTTCTGTTAAAGAAGGTTCTAATCCTGCTTGGTGA 1527 46.56 MLLSPGHSPRHISSPSPSTVSENAIQNLPSSSSITPRSSRKHPKVLDEDAYVEAIENIIERDYFPDISKLRDRLDWLEAIKSEDPILIRDAQLKIMERRGQKVKRLNPDGKSQTPGSTFMRSFTSFDGFEGKTPKTPLFGKSDIAGETEEGGCDGKVVDESLSLDEFFRQYTSEDNFSFSKILDKDNRKRKERYAYLTEGEKEVMKSIEDVKRDRITDGYGTSDQPPSTLEGWKYTAKNLLMYHPSDRGEAPLTEEEMAVRLKGLTKEINRTSTRFHGKLMDSRPKGDGTVEVLYTPVAGSTPYPVSNRDGDRLKKYDLEDLRKTPNPFYVESGKKAENGYGFVRTPSPAPGVDESPFITWGEIEGTPLRLDPEETPIDIGGTVDGPRYNIPCPPARDEKAHSLSREAARKLREKSKMFQKPPLPSPVRGGSASPSVRRTLSPAAQKFVRNAIAKSTSSFDETLRASYRGRSPSSATPKSGRSLSRFARDGSFGSRSPSVKEGSNPAW 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6821030 6822556 + Cp4.1LG04g04030.1 Cpe04g00678 468240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00678 508 Pfam Nuclear protein Es2 43 448 IPR019148 -
Cpe04g00678 508 MobiDBLite consensus disorder prediction 1 46 - -
Cpe04g00678 508 MobiDBLite consensus disorder prediction 9 39 - -
Cpe04g00678 508 MobiDBLite consensus disorder prediction 399 418 - -
Cpe04g00678 508 PANTHER BNAA05G29860D PROTEIN 1 498 - -
Cpe04g00678 508 MobiDBLite consensus disorder prediction 368 508 - -
Cpe04g00678 508 PANTHER ES-2 PROTEIN - RELATED 1 498 IPR019148 -
Cpe04g00678 508 MobiDBLite consensus disorder prediction 451 482 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00678 Cpe16g00392 CCT
Cpe04g00678 Cpe05g01401 CCT
Cpe04g00678 Cpe16g00392 ECH
Cpe04g00678 Cpe05g01401 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00678 K13118 - csv:101212240 930.243