Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe04g00711 | ATGGCACAGTTGCCGCCGAAGATCCCAAACATGCCGCCGAATAATTGGCCGGAAACCTTCCCCCCCACCACCACACTTCCGGTCACCCACCAAAATCCTTCATGGGTTGACGAATTTCTTGATTTCTCTTCCTCCAGACGTGGCTCTCACCGGCGCTCCGTTAGCGATTCGATCACATTCCTCGAAATGCCAATGCCGGAGGATGATTGTCAAGGCTCCGACGCCGCGCCGACGACGGGATCTGGCAACGAATTTGATAGATTTGACGACGACCAATTCCTGTCGATGTTTAATGACGAAATCTCCGCCGCTGTTGCGCCGACTTTGTCGTCGTCGAACACCTCCACGCCGTCCGATCACACCAGCATTAACGACGAAAAAGACGGCCAACAAAGCCGGAACAAAAACGAATCCGACGAAGTACAGAGTCAACAGCAATCCAAAATTCAAACGCAATCCAATTCGCCGGCGCCGGCGGCCTCCGCCGATAGAATAACAGATCCAAAAAGAGTAAAAAGAATTCTGGCAAATCGGCAATCGGCGCAAAGATCACGAGTGAGGAAGCTTCAATACATATCGGAACTTGAACGAAGCGTCACGTCGTTGCAGGCGGAGGTATCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCAACAGAGATTGCTTCTCAACGTCGACAACAGCGCTTTGAAGCAAAGAATCGCCGCCCTTGCACAAGATAAGATTTTTAAAGATGCTCATCAAGAGGCTCTCAAAAGAGAGATAGAGAGACTAAGACAAGTTTATCACCAACAAAACATCAAGAACAATGACAATCCACCGCCTCCCACCGCCATCGCCACCGCCACCGCCACCGCCATCGACGCCAAGCTTCCGAATGTAGATCAAAAGGGCCAAGTTCTTAACGTCGTCGTTTAG | 918 | 51.42 | MAQLPPKIPNMPPNNWPETFPPTTTLPVTHQNPSWVDEFLDFSSSRRGSHRRSVSDSITFLEMPMPEDDCQGSDAAPTTGSGNEFDRFDDDQFLSMFNDEISAAVAPTLSSSNTSTPSDHTSINDEKDGQQSRNKNESDEVQSQQQSKIQTQSNSPAPAASADRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDQQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKNNDNPPPPTAIATATATAIDAKLPNVDQKGQVLNVVV | 305 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 7042919 | 7045217 | + | Cp4.1LG04g03770.1 | Cpe04g00711 | 468273 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe04g00711 | 305 | MobiDBLite | consensus disorder prediction | 121 | 135 | - | - | |
| Cpe04g00711 | 305 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Cpe04g00711 | 305 | PANTHER | BASIC LEUCINE ZIPPER 34 | 1 | 282 | - | - | |
| Cpe04g00711 | 305 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Cpe04g00711 | 305 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 172 | 187 | IPR004827 | GO:0003700|GO:0006355 | |
| Cpe04g00711 | 305 | Gene3D | - | 168 | 266 | - | - | |
| Cpe04g00711 | 305 | SUPERFAMILY | Leucine zipper domain | 169 | 223 | IPR046347 | GO:0003700|GO:0006355 | |
| Cpe04g00711 | 305 | MobiDBLite | consensus disorder prediction | 107 | 170 | - | - | |
| Cpe04g00711 | 305 | MobiDBLite | consensus disorder prediction | 136 | 160 | - | - | |
| Cpe04g00711 | 305 | CDD | bZIP_plant_RF2 | 170 | 220 | IPR044759 | GO:0003700|GO:0006355 | |
| Cpe04g00711 | 305 | Coils | Coil | 248 | 268 | - | - | |
| Cpe04g00711 | 305 | MobiDBLite | consensus disorder prediction | 44 | 88 | - | - | |
| Cpe04g00711 | 305 | Pfam | bZIP transcription factor | 169 | 213 | IPR004827 | GO:0003700|GO:0006355 | |
| Cpe04g00711 | 305 | PANTHER | BASIC LEUCINE ZIPPER 61-LIKE | 1 | 282 | - | - | |
| Cpe04g00711 | 305 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 167 | 219 | IPR004827 | GO:0003700|GO:0006355 | |
| Cpe04g00711 | 305 | SMART | brlzneu | 165 | 229 | IPR004827 | GO:0003700|GO:0006355 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe04g00711 | Cpe16g00416 | CCT | |
| Cpe04g00711 | Cpe16g00416 | ECH | |
| Cpe04g00711 | Cpe15g00729 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe03g00417 | Cpe-Chr3:2330568 | Cpe04g00711 | Cpe-Chr4:7042919 | 6.94E-07 | dispersed | |
| Cpe04g00711 | Cpe-Chr4:7042919 | Cpe06g00663 | Cpe-Chr6:4128591 | 2.44E-94 | dispersed | |
| Cpe20g00883 | Cpe-Chr20:7906800 | Cpe04g00711 | Cpe-Chr4:7042919 | 6.54E-13 | dispersed | |
| Cpe16g00665 | Cpe-Chr16:6981387 | Cpe04g00711 | Cpe-Chr4:7042919 | 6.59E-19 | transposed | |
| Cpe15g00729 | Cpe-Chr15:7664302 | Cpe04g00711 | Cpe-Chr4:7042919 | 3.62E-151 | wgd | |
| Cpe16g00416 | Cpe-Chr16:5592361 | Cpe04g00711 | Cpe-Chr4:7042919 | 1.73E-54 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 49363 | PF07716 | bZIP_2 | 2.10E-09 | CL0018 | Cpe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe04g00711 | - | - | cmax:111486081 | 542.347 |