Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00711 ATGGCACAGTTGCCGCCGAAGATCCCAAACATGCCGCCGAATAATTGGCCGGAAACCTTCCCCCCCACCACCACACTTCCGGTCACCCACCAAAATCCTTCATGGGTTGACGAATTTCTTGATTTCTCTTCCTCCAGACGTGGCTCTCACCGGCGCTCCGTTAGCGATTCGATCACATTCCTCGAAATGCCAATGCCGGAGGATGATTGTCAAGGCTCCGACGCCGCGCCGACGACGGGATCTGGCAACGAATTTGATAGATTTGACGACGACCAATTCCTGTCGATGTTTAATGACGAAATCTCCGCCGCTGTTGCGCCGACTTTGTCGTCGTCGAACACCTCCACGCCGTCCGATCACACCAGCATTAACGACGAAAAAGACGGCCAACAAAGCCGGAACAAAAACGAATCCGACGAAGTACAGAGTCAACAGCAATCCAAAATTCAAACGCAATCCAATTCGCCGGCGCCGGCGGCCTCCGCCGATAGAATAACAGATCCAAAAAGAGTAAAAAGAATTCTGGCAAATCGGCAATCGGCGCAAAGATCACGAGTGAGGAAGCTTCAATACATATCGGAACTTGAACGAAGCGTCACGTCGTTGCAGGCGGAGGTATCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCAACAGAGATTGCTTCTCAACGTCGACAACAGCGCTTTGAAGCAAAGAATCGCCGCCCTTGCACAAGATAAGATTTTTAAAGATGCTCATCAAGAGGCTCTCAAAAGAGAGATAGAGAGACTAAGACAAGTTTATCACCAACAAAACATCAAGAACAATGACAATCCACCGCCTCCCACCGCCATCGCCACCGCCACCGCCACCGCCATCGACGCCAAGCTTCCGAATGTAGATCAAAAGGGCCAAGTTCTTAACGTCGTCGTTTAG 918 51.42 MAQLPPKIPNMPPNNWPETFPPTTTLPVTHQNPSWVDEFLDFSSSRRGSHRRSVSDSITFLEMPMPEDDCQGSDAAPTTGSGNEFDRFDDDQFLSMFNDEISAAVAPTLSSSNTSTPSDHTSINDEKDGQQSRNKNESDEVQSQQQSKIQTQSNSPAPAASADRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDQQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKNNDNPPPPTAIATATATAIDAKLPNVDQKGQVLNVVV 305
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 7042919 7045217 + Cp4.1LG04g03770.1 Cpe04g00711 468273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00711 305 MobiDBLite consensus disorder prediction 121 135 - -
Cpe04g00711 305 MobiDBLite consensus disorder prediction 1 30 - -
Cpe04g00711 305 PANTHER BASIC LEUCINE ZIPPER 34 1 282 - -
Cpe04g00711 305 MobiDBLite consensus disorder prediction 1 20 - -
Cpe04g00711 305 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Cpe04g00711 305 Gene3D - 168 266 - -
Cpe04g00711 305 SUPERFAMILY Leucine zipper domain 169 223 IPR046347 GO:0003700|GO:0006355
Cpe04g00711 305 MobiDBLite consensus disorder prediction 107 170 - -
Cpe04g00711 305 MobiDBLite consensus disorder prediction 136 160 - -
Cpe04g00711 305 CDD bZIP_plant_RF2 170 220 IPR044759 GO:0003700|GO:0006355
Cpe04g00711 305 Coils Coil 248 268 - -
Cpe04g00711 305 MobiDBLite consensus disorder prediction 44 88 - -
Cpe04g00711 305 Pfam bZIP transcription factor 169 213 IPR004827 GO:0003700|GO:0006355
Cpe04g00711 305 PANTHER BASIC LEUCINE ZIPPER 61-LIKE 1 282 - -
Cpe04g00711 305 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 219 IPR004827 GO:0003700|GO:0006355
Cpe04g00711 305 SMART brlzneu 165 229 IPR004827 GO:0003700|GO:0006355
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe04g00711 Cpe16g00416 CCT
Cpe04g00711 Cpe16g00416 ECH
Cpe04g00711 Cpe15g00729 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00417 Cpe-Chr3:2330568 Cpe04g00711 Cpe-Chr4:7042919 6.94E-07 dispersed
Cpe04g00711 Cpe-Chr4:7042919 Cpe06g00663 Cpe-Chr6:4128591 2.44E-94 dispersed
Cpe20g00883 Cpe-Chr20:7906800 Cpe04g00711 Cpe-Chr4:7042919 6.54E-13 dispersed
Cpe16g00665 Cpe-Chr16:6981387 Cpe04g00711 Cpe-Chr4:7042919 6.59E-19 transposed
Cpe15g00729 Cpe-Chr15:7664302 Cpe04g00711 Cpe-Chr4:7042919 3.62E-151 wgd
Cpe16g00416 Cpe-Chr16:5592361 Cpe04g00711 Cpe-Chr4:7042919 1.73E-54 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49363 PF07716 bZIP_2 2.10E-09 CL0018 Cpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00711 - - cmax:111486081 542.347