Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00720 ATGGAAGCCGCCGCCCCTTCTCCTCCTCCTCCTCCTCCCCCCACCGCTACCCTCCACTTTCCGGTCAACCTCAACTCCACCCTCCACGAACCTCCTCCCTCTCCTCCCCCCTCTCCTCCTCCCTCTCCTCCTCCCCCACCGCCCTTCTTCCACTCCCACCGCGCCCTCTTCGACGAAATGAACTTCTTCGCCGCCGATGATAAATCCCGCGTTCTTATCTCCGCCGCTGACTCCAAGCTCCGTGCCTCCGACAACCTCAGTCCCACCAAGCTCGAATTTCAAGTAAATGTAGGTCACCCACTGAATTTTCTGACAGGGTTGAATCTGTTGACCACCAATTACAGCAGCGATCAATCCATGGTGGACGATGGAATTTCATCGAACCCACAAGACACAAAAACAAAAAACGAGAGAGCAGTTCTTCAAGCTGAATTGGAGAGAGTGAACACAGAGAATCAACGGTTAAAAGACACGTTAAATCAAGTCACCAGCAATTACCAATCGCTGCAGATGCAGTTCACAACGCTAATTCAAACCCAGAAGGCAGCCGACGCCGGCGATTCAACTGACGAGAAGGCCGGCGACCAAGAAACGATCCGACACGGCGGTGGCGGAGCGAATAATGGTAATAAGCTGGTGCCGAGGCAGTTTATGGATCTTGGATTGGCTACGAATGCGGACATTGATGAGCCATCGATGTCATCATCGGAAGGGAGGAGTGATCGGTCCCCGGGTACTACCGGAGAAGTGGCGTCGTCAAAACGACATAGCCCGGATCAAGGTTCGAATTTGGGTTCAAACAAGGCTTCTAAATTCATTTCTTCGTCCTCGGGTAAAGACGTGGATCAAACTGAAGCTACTATGAGAAAAGCTCGAGTCTCCGTTCGAGCTAGATCGGAAGCTCCCATGATCACGGACGGATGTCAATGGCGAAAATACGGACAAAAAATGGCTAAGGGAAACCCTTGTCCTCGAGCTTACTATCGATGCACCATGGCCGCTGACAAGACAATTTTGATAACAACGTACGAAGGCAACCACAACCATCCATTGCCGCCGGCCGCCATGGCAATGGCATCAACAACATCATCAGCGGCCAGAATGCTTCTATCAGGCTCCATGTCAAGTGCCGACGGTTTAATGAACCCAAATTTTCTAGCAAGAACCCTATTGCCATGTTCTTCAAGCATGGCTACAATCTCGGCCTCGGCCCCATTTCCGACGGTGACATTAGACCTAACACAAACCCCGAACCCTTTATTCCAACGACCCGCACCGGGTCACTTCCCGATCCCGTTCGCAGCCGGTCCGACTCAAAGCTTCCCACAAATTTTTGGACATGCCCTATACAATCAATCAAAATTCTCCGGCCTCCAAATGTCGAAGGAGATAGAAGCGGCTACTCCTCCTCCGTCGCAAAATCCATTGGCCGACACGTTGAGCGCGGCGAGTGCGGCGATCGCTTCCGACCCGAATTTCATTGCAGCGTTGGCTTCGGCGATGACGTCGTTGATCGGCGGATCGCATCATCAAAAGGAGAATGGGAATGGGAATGGGAATAATAATGTTGATAATAACACAACAAGCAACTCCCAACAG 1599 51.84 MEAAAPSPPPPPPPTATLHFPVNLNSTLHEPPPSPPPSPPPSPPPPPPFFHSHRALFDEMNFFAADDKSRVLISAADSKLRASDNLSPTKLEFQVNVGHPLNFLTGLNLLTTNYSSDQSMVDDGISSNPQDTKTKNERAVLQAELERVNTENQRLKDTLNQVTSNYQSLQMQFTTLIQTQKAADAGDSTDEKAGDQETIRHGGGGANNGNKLVPRQFMDLGLATNADIDEPSMSSSEGRSDRSPGTTGEVASSKRHSPDQGSNLGSNKASKFISSSSGKDVDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAADKTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSMSSADGLMNPNFLARTLLPCSSSMATISASAPFPTVTLDLTQTPNPLFQRPAPGHFPIPFAAGPTQSFPQIFGHALYNQSKFSGLQMSKEIEAATPPPSQNPLADTLSAASAAIASDPNFIAALASAMTSLIGGSHHQKENGNGNGNNNVDNNTTSNSQQ 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7091741 7094337 + Cp4.1LG04g03650.1 Cpe04g00720 468282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00720 533 Pfam WRKY DNA -binding domain 306 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe04g00720 533 SMART WRKY_cls 304 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe04g00720 533 Gene3D WRKY domain 289 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe04g00720 533 ProSiteProfiles WRKY domain profile. 299 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe04g00720 533 MobiDBLite consensus disorder prediction 227 298 - -
Cpe04g00720 533 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 529 IPR044810 GO:0003700
Cpe04g00720 533 MobiDBLite consensus disorder prediction 1 50 - -
Cpe04g00720 533 MobiDBLite consensus disorder prediction 1 18 - -
Cpe04g00720 533 MobiDBLite consensus disorder prediction 228 282 - -
Cpe04g00720 533 SUPERFAMILY WRKY DNA-binding domain 297 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe04g00720 533 Coils Coil 138 172 - -
Cpe04g00720 533 MobiDBLite consensus disorder prediction 28 50 - -
Cpe04g00720 533 PANTHER OS05G0567200 PROTEIN 52 529 - -
Cpe04g00720 533 MobiDBLite consensus disorder prediction 184 212 - -
Cpe04g00720 533 MobiDBLite consensus disorder prediction 507 533 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00720 Cpe15g00738 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00720 Cpe-Chr4:7091741 Cpe19g00951 Cpe-Chr19:6777505 5.79E-124 dispersed
Cpe04g01513 Cpe-Chr4:11927860 Cpe04g00720 Cpe-Chr4:7091741 1.98E-25 dispersed
Cpe15g00738 Cpe-Chr15:7706728 Cpe04g00720 Cpe-Chr4:7091741 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49365 PF03106 WRKY 5.40E-11 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00720 - - cmos:111437115 888.641