Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00733 | ATGCCAGCCGGAATGATGATTCCAGCCAGAAATGCGCCGTCGATGATCGGAAGAAATGGGAATGTCGGTGTTTTTGGCTCTCCGGCGAGCCTTGTTCTTGGTCAGGCAAATATGATGGAAGGGGCGCAGCTACATGCATTAGACATGCCACAAAGCGATCGATCGCATTTCAGCCATAGCAGCAAAGTACGTAGGAAAGCCAGTTTCAAGCTTCCCTCTTCTTTCCCCATCAATTCCCACACATCCTCTAGAGCTCGGAATGGGCAGCTATGGAGCCGACATAATCAGTGGTCGGCCGTTTTCACTGGGATTGTCTCGAGGGCTACGACATTGGAGATTCTGTCCACCGGCGTTGCCGGTAACTACGACGGTGCATTACAAGTGATGGCGTCGGAATTGCAAGTGCCATCGCCGCTCGTTCCGACTCGGGAGAGCTATTTTGTGAGGTACTGTAAGCAACATGGCGAGGGAACATGGGCTGTCGTGGACGTGTCGTTGGATAATTTACGCCCTGCTCCGGCTCTTCGATGTAGAAGAAGGCCTTCCGGCTGTTTGATCCTAGAAATGCCTCAGGGCTATTCTAAGGTTACGTGGGTCGAGCATGTTGAGGTGGATGATCGAGGGATCCATAGTTTGTACAATCAGTTTGTTAGATCTGGTCACGCCTTCGGTGCAAAGCGTTGGATCGCCACGTTGGATCGTCAGTGTGAACGTCTTGCTAGTGCCATGTTGACGAGTATTCCGAACGGTGATGCGGGTGTGATAATGAATCAAGAAGGAAGAAAGAGCATGCTGAAGCTAGCAGAGAGAATGGTGATGAGCTTTTGCGGCGGAGTGAGCGCGTCGACCGCGCACACGTGGACAACACTGTCAGGAACGGGAGCCGATGATGTCAGAGTCATGACTCGTAAGAGCATAGACGATCCCGGCAGGCCACCTGGCATTGTCCTCAGCGCCGCCACATCCTTTTGGCTGCCTGTTCCTCCTAAGAGAGTCTTCGACTTTCTCAGAGATGAAAATTCTCGTAACGAGTGGGATATTCTATCAAACGGTGGAGTTGTGCAAGAAATGGCCCACATTGCCAATGGCCGTGACACGGGCAACTCGGTCTCATTGTTACGAGTAAATAGTCCAAATTCAAGTCAAAGCAACATGTTGATATTACAAGAGAACATCACGGATCAAACCGCCGCGTTTGTGATCTACGCTCCGGTAGACATTGTGGCCATCAACGTGGTACTAAACGGTGGCGATCCCGATTACGTCGCCCTTCTCCCCTCTGGATTTGCCATTCTTCCCGACGGAACCGCCGCGTCGAACGACGGGGCTAACAGCATCATGGAACATGGCTCAGGCGGGTCGCTGTTAACCGTTGCATTTCAGATCTTGGTCGACTCGATTCCGACGGCTAAACTATCACTTGGGTCGGTAGCGACGGTTAACAACCTGATTGCTTGTACTGTGGAGAGGATTAGAGCCTCTCTTTCGTGTGAGAATCCATGA | 1503 | 51.7 | MPAGMMIPARNAPSMIGRNGNVGVFGSPASLVLGQANMMEGAQLHALDMPQSDRSHFSHSSKVRRKASFKLPSSFPINSHTSSRARNGQLWSRHNQWSAVFTGIVSRATTLEILSTGVAGNYDGALQVMASELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRRRPSGCLILEMPQGYSKVTWVEHVEVDDRGIHSLYNQFVRSGHAFGAKRWIATLDRQCERLASAMLTSIPNGDAGVIMNQEGRKSMLKLAERMVMSFCGGVSASTAHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNSVSLLRVNSPNSSQSNMLILQENITDQTAAFVIYAPVDIVAINVVLNGGDPDYVALLPSGFAILPDGTAASNDGANSIMEHGSGGSLLTVAFQILVDSIPTAKLSLGSVATVNNLIACTVERIRASLSCENP | 500 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7208678 | 7213435 | + | Cp4.1LG04g03550.1 | Cpe04g00733 | 468295 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00733 | 500 | CDD | START_ArGLABRA2_like | 95 | 237 | - | - | |
Cpe04g00733 | 500 | SUPERFAMILY | Bet v1-like | 105 | 240 | - | - | |
Cpe04g00733 | 500 | ProSiteProfiles | START domain profile. | 93 | 241 | IPR002913 | GO:0008289 | |
Cpe04g00733 | 500 | PANTHER | HOMEOBOX LEUCINE ZIPPER PROTEIN | 94 | 497 | - | - | |
Cpe04g00733 | 500 | Gene3D | - | 102 | 235 | IPR023393 | - | |
Cpe04g00733 | 500 | Pfam | START domain | 92 | 238 | IPR002913 | GO:0008289 | |
Cpe04g00733 | 500 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 94 | 497 | IPR042160 | - | |
Cpe04g00733 | 500 | SMART | START_1 | 37 | 238 | IPR002913 | GO:0008289 | |
Cpe04g00733 | 500 | SUPERFAMILY | Bet v1-like | 258 | 492 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g00733 | Cpe05g01445 | CCT | |
Cpe04g00733 | Cpe16g00448 | CCT | |
Cpe04g00733 | Cpe05g01445 | ECH | |
Cpe04g00733 | Cpe16g00448 | ECH | |
Cpe04g00733 | Cpe15g00750 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00755 | Cpe-Chr2:4827195 | Cpe04g00733 | Cpe-Chr4:7208678 | 4.28E-112 | dispersed | |
Cpe02g01683 | Cpe-Chr2:13891719 | Cpe04g00733 | Cpe-Chr4:7208678 | 1.99E-64 | dispersed | |
Cpe04g00733 | Cpe-Chr4:7208678 | Cpe19g00972 | Cpe-Chr19:6850520 | 0 | dispersed | |
Cpe17g00350 | Cpe-Chr17:2471558 | Cpe04g00733 | Cpe-Chr4:7208678 | 4.17E-105 | dispersed | |
Cpe17g00552 | Cpe-Chr17:4565874 | Cpe04g00733 | Cpe-Chr4:7208678 | 3.46E-62 | dispersed | |
Cpe20g00054 | Cpe-Chr20:259862 | Cpe04g00733 | Cpe-Chr4:7208678 | 3.70E-103 | dispersed | |
Cpe15g00750 | Cpe-Chr15:7784636 | Cpe04g00733 | Cpe-Chr4:7208678 | 3.56E-11 | wgd | |
Cpe16g00448 | Cpe-Chr16:5744649 | Cpe04g00733 | Cpe-Chr4:7208678 | 1.55E-19 | wgd | |
Cpe20g00379 | Cpe-Chr20:2136801 | Cpe04g00733 | Cpe-Chr4:7208678 | 0 | wgd | |
Cpe04g00733 | Cpe-Chr4:7208678 | Cpe05g01445 | Cpe-Chr5:10078047 | 2.35E-10 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00733 | K09338 | - | csv:101219415 | 736.102 |