Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00733 ATGCCAGCCGGAATGATGATTCCAGCCAGAAATGCGCCGTCGATGATCGGAAGAAATGGGAATGTCGGTGTTTTTGGCTCTCCGGCGAGCCTTGTTCTTGGTCAGGCAAATATGATGGAAGGGGCGCAGCTACATGCATTAGACATGCCACAAAGCGATCGATCGCATTTCAGCCATAGCAGCAAAGTACGTAGGAAAGCCAGTTTCAAGCTTCCCTCTTCTTTCCCCATCAATTCCCACACATCCTCTAGAGCTCGGAATGGGCAGCTATGGAGCCGACATAATCAGTGGTCGGCCGTTTTCACTGGGATTGTCTCGAGGGCTACGACATTGGAGATTCTGTCCACCGGCGTTGCCGGTAACTACGACGGTGCATTACAAGTGATGGCGTCGGAATTGCAAGTGCCATCGCCGCTCGTTCCGACTCGGGAGAGCTATTTTGTGAGGTACTGTAAGCAACATGGCGAGGGAACATGGGCTGTCGTGGACGTGTCGTTGGATAATTTACGCCCTGCTCCGGCTCTTCGATGTAGAAGAAGGCCTTCCGGCTGTTTGATCCTAGAAATGCCTCAGGGCTATTCTAAGGTTACGTGGGTCGAGCATGTTGAGGTGGATGATCGAGGGATCCATAGTTTGTACAATCAGTTTGTTAGATCTGGTCACGCCTTCGGTGCAAAGCGTTGGATCGCCACGTTGGATCGTCAGTGTGAACGTCTTGCTAGTGCCATGTTGACGAGTATTCCGAACGGTGATGCGGGTGTGATAATGAATCAAGAAGGAAGAAAGAGCATGCTGAAGCTAGCAGAGAGAATGGTGATGAGCTTTTGCGGCGGAGTGAGCGCGTCGACCGCGCACACGTGGACAACACTGTCAGGAACGGGAGCCGATGATGTCAGAGTCATGACTCGTAAGAGCATAGACGATCCCGGCAGGCCACCTGGCATTGTCCTCAGCGCCGCCACATCCTTTTGGCTGCCTGTTCCTCCTAAGAGAGTCTTCGACTTTCTCAGAGATGAAAATTCTCGTAACGAGTGGGATATTCTATCAAACGGTGGAGTTGTGCAAGAAATGGCCCACATTGCCAATGGCCGTGACACGGGCAACTCGGTCTCATTGTTACGAGTAAATAGTCCAAATTCAAGTCAAAGCAACATGTTGATATTACAAGAGAACATCACGGATCAAACCGCCGCGTTTGTGATCTACGCTCCGGTAGACATTGTGGCCATCAACGTGGTACTAAACGGTGGCGATCCCGATTACGTCGCCCTTCTCCCCTCTGGATTTGCCATTCTTCCCGACGGAACCGCCGCGTCGAACGACGGGGCTAACAGCATCATGGAACATGGCTCAGGCGGGTCGCTGTTAACCGTTGCATTTCAGATCTTGGTCGACTCGATTCCGACGGCTAAACTATCACTTGGGTCGGTAGCGACGGTTAACAACCTGATTGCTTGTACTGTGGAGAGGATTAGAGCCTCTCTTTCGTGTGAGAATCCATGA 1503 51.7 MPAGMMIPARNAPSMIGRNGNVGVFGSPASLVLGQANMMEGAQLHALDMPQSDRSHFSHSSKVRRKASFKLPSSFPINSHTSSRARNGQLWSRHNQWSAVFTGIVSRATTLEILSTGVAGNYDGALQVMASELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRRRPSGCLILEMPQGYSKVTWVEHVEVDDRGIHSLYNQFVRSGHAFGAKRWIATLDRQCERLASAMLTSIPNGDAGVIMNQEGRKSMLKLAERMVMSFCGGVSASTAHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNSVSLLRVNSPNSSQSNMLILQENITDQTAAFVIYAPVDIVAINVVLNGGDPDYVALLPSGFAILPDGTAASNDGANSIMEHGSGGSLLTVAFQILVDSIPTAKLSLGSVATVNNLIACTVERIRASLSCENP 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7208678 7213435 + Cp4.1LG04g03550.1 Cpe04g00733 468295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00733 500 CDD START_ArGLABRA2_like 95 237 - -
Cpe04g00733 500 SUPERFAMILY Bet v1-like 105 240 - -
Cpe04g00733 500 ProSiteProfiles START domain profile. 93 241 IPR002913 GO:0008289
Cpe04g00733 500 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 94 497 - -
Cpe04g00733 500 Gene3D - 102 235 IPR023393 -
Cpe04g00733 500 Pfam START domain 92 238 IPR002913 GO:0008289
Cpe04g00733 500 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 94 497 IPR042160 -
Cpe04g00733 500 SMART START_1 37 238 IPR002913 GO:0008289
Cpe04g00733 500 SUPERFAMILY Bet v1-like 258 492 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00733 Cpe05g01445 CCT
Cpe04g00733 Cpe16g00448 CCT
Cpe04g00733 Cpe05g01445 ECH
Cpe04g00733 Cpe16g00448 ECH
Cpe04g00733 Cpe15g00750 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00755 Cpe-Chr2:4827195 Cpe04g00733 Cpe-Chr4:7208678 4.28E-112 dispersed
Cpe02g01683 Cpe-Chr2:13891719 Cpe04g00733 Cpe-Chr4:7208678 1.99E-64 dispersed
Cpe04g00733 Cpe-Chr4:7208678 Cpe19g00972 Cpe-Chr19:6850520 0 dispersed
Cpe17g00350 Cpe-Chr17:2471558 Cpe04g00733 Cpe-Chr4:7208678 4.17E-105 dispersed
Cpe17g00552 Cpe-Chr17:4565874 Cpe04g00733 Cpe-Chr4:7208678 3.46E-62 dispersed
Cpe20g00054 Cpe-Chr20:259862 Cpe04g00733 Cpe-Chr4:7208678 3.70E-103 dispersed
Cpe15g00750 Cpe-Chr15:7784636 Cpe04g00733 Cpe-Chr4:7208678 3.56E-11 wgd
Cpe16g00448 Cpe-Chr16:5744649 Cpe04g00733 Cpe-Chr4:7208678 1.55E-19 wgd
Cpe20g00379 Cpe-Chr20:2136801 Cpe04g00733 Cpe-Chr4:7208678 0 wgd
Cpe04g00733 Cpe-Chr4:7208678 Cpe05g01445 Cpe-Chr5:10078047 2.35E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00733 K09338 - csv:101219415 736.102