Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe04g00735 | ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGGGCAAAAGAGTATGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGTCTGACAACTGTTCAAGGATTGAAGAAGGAGTTTAGTTATAACAAAATACTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGGATTGTGAAGAAGGAAAATATAAAGATTCACGGTTTCTAA | 342 | 42.4 | MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF | 113 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 7219091 | 7221730 | - | Cp4.1LG04g03460.1 | Cpe04g00735 | 468297 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe04g00735 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
| Cpe04g00735 | 113 | PIRSF | Transl_init_SUI1_Euk | 1 | 113 | IPR005874 | GO:0003743 | |
| Cpe04g00735 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743|GO:0006413 | |
| Cpe04g00735 | 113 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 6 | 113 | IPR005874 | GO:0003743 | |
| Cpe04g00735 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 102 | IPR001950 | GO:0003743|GO:0006413 | |
| Cpe04g00735 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
| Cpe04g00735 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743 | |
| Cpe04g00735 | 113 | Gene3D | - | 1 | 113 | - | - | |
| Cpe04g00735 | 113 | SUPERFAMILY | eIF1-like | 4 | 113 | IPR036877 | GO:0003743|GO:0006413 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe04g00735 | Cpe15g00752 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe04g00735 | Cpe-Chr4:7219091 | Cpe15g00752 | Cpe-Chr15:7797833 | 2.33E-81 | dispersed | |
| Cpe04g00735 | Cpe-Chr4:7219091 | Cpe04g00736 | Cpe-Chr4:7222585 | 7.21E-81 | tandem | |
| Cpe15g00751 | Cpe-Chr15:7791911 | Cpe04g00735 | Cpe-Chr4:7219091 | 1.89E-44 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe04g00735 | K03113 | - | csv:101219651 | 228.409 |