Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00736 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGTCAAAAGAGTATGTTCACGTGCGCATTCAGCAACGCAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTTAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGGTTTCTAA 342 44.15 MSEFNVQIPSAFDPFADANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7222585 7225287 - Cp4.1LG04g03450.1 Cpe04g00736 468298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00736 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Cpe04g00736 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Cpe04g00736 113 Gene3D - 1 113 - -
Cpe04g00736 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Cpe04g00736 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Cpe04g00736 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Cpe04g00736 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Cpe04g00736 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Cpe04g00736 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00736 Cpe-Chr4:7222585 Cpe15g00752 Cpe-Chr15:7797833 7.21E-81 dispersed
Cpe04g00735 Cpe-Chr4:7219091 Cpe04g00736 Cpe-Chr4:7222585 7.21E-81 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00736 K03113 - csv:101219651 227.254