Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00768 ATGGGTGGTTGTGTCTCTACGAGTAGCCATAGTACTAGTAGTAGCCAGAGCAATGGGGAATCAGTGTCTTCCTCGTGTTTGGGAATTGAATTTCGAGGTCGAAAACGAACGAAACGAACATTTTCCGACCATGTTTACGCTCTTCAGAAGCTCTCTTCAGCTTCCAATAGGATCTTCATGAACGGGAAGAGTCGTTGTTCGTGCATTTTCACGCAACAAGGTCGAAAGGGCATCAACCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTTGGAGGACACGATCTTTTGTGGTGTGTTCGATGGTCACGGACCTTACGGGCATCTCGTTGCTCGAAAAGTTAGGGATACATTGCCTATAAAGTTGCTGTCATTCTTCCAGTCTCCTCAGTTGAAGCAAAAGAACTCTGCTAAAACGTGTTTCCAGAGGAATTTGAAGACGCCTCGAGAATGTGACGATTCTGATAAGGATCGTTTTATCGAGGACTCGCTGAATTCGGTATGGAGAGATGCGTTTTTGAACTCGTATAAAGCTATGGATAAGGAGCTGAGATCACACCCTAATCTGGACTGCTTTTGTAGTGGTAGCACTGCAGTCACCATTGTTAAACAGGGGTCGAATCTGTTCATGGGGTATATCGGAGACTCTCGAGCAATCCTTGCTTCAAAGGACGCCAATGACTCGACTGTGGCGGTTCAATTGACCGTCGATCTTAAGCCAGATTTGCCAAGAGAAGCTGAAAGAATCAAAAGGTGTAAAGGTAGAGTTTTTGCATTGCAAGATGAGCCTGAAGTGTCAAGGGTATGGTTACCTTTCGACGATGCGCCCGGTTTAGCTATGGCTCGAGCATTTGGCGATTTCTGTTTGAAAGAATACGGAGTTATCTCTATACCTGAATTCTCTCATCGAACGCTCACTGACGCCGATCAGTTCATTGTTCTTGCATCAGATGGGGTATGGGATGTGTTGAGCAATGAAGAGGTGGTTGAAATAGTGTCCTCGGCCCCGACTCGCTCGTCTGCTGCGAGGTCTGTGGTTGACTCTGCTGCTCGTGAATGGAAGCTCAAATACCCCACCTCGAAAATGGACGACTGTGCTGTCGTCTGCTTGTTTCTCGACGGGAAGATGGACTCTGAATCCGACTGTGAAGAACAAGGCTTCTCATCTGCAACATTGCGGAGTAATCATTCGGGTACTGCTGTCGAATCCGATGATGGCCAGAGGTCCGAGCCATGCTTGCAAAGGAACAACACTGTCAGATCATCAGAAGATGGCAGTAGTTTTGGAGGATTACCAGTCGACGACGGGGAGACCGGTGATGCTACACCTGCAGACGATCAAAACTGGTCGGGTTTAGAAGGAGTCACTCGAGTAAACTCGCTTGTTCAACTTCCTAGATTCTCTGATGAAAGGCCAGTGTCATAG 1425 47.37 MGGCVSTSSHSTSSSQSNGESVSSSCLGIEFRGRKRTKRTFSDHVYALQKLSSASNRIFMNGKSRCSCIFTQQGRKGINQDAMVVWEDFMLEDTIFCGVFDGHGPYGHLVARKVRDTLPIKLLSFFQSPQLKQKNSAKTCFQRNLKTPRECDDSDKDRFIEDSLNSVWRDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAILASKDANDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVSRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARSVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCEEQGFSSATLRSNHSGTAVESDDGQRSEPCLQRNNTVRSSEDGSSFGGLPVDDGETGDATPADDQNWSGLEGVTRVNSLVQLPRFSDERPVS 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7384328 7388474 - Cp4.1LG04g03030.1 Cpe04g00768 468330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00768 474 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 462 - -
Cpe04g00768 474 MobiDBLite consensus disorder prediction 387 455 - -
Cpe04g00768 474 SUPERFAMILY PP2C-like 58 374 IPR036457 -
Cpe04g00768 474 Pfam Protein phosphatase 2C 161 349 IPR001932 -
Cpe04g00768 474 Gene3D - 54 374 IPR036457 -
Cpe04g00768 474 PANTHER ALPHABET, ISOFORM E-RELATED 1 462 - -
Cpe04g00768 474 MobiDBLite consensus disorder prediction 387 425 - -
Cpe04g00768 474 ProSiteProfiles PPM-type phosphatase domain profile. 66 372 IPR001932 -
Cpe04g00768 474 MobiDBLite consensus disorder prediction 1 23 - -
Cpe04g00768 474 CDD PP2Cc 72 372 IPR001932 -
Cpe04g00768 474 SMART PP2C_4 50 370 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00768 Cpe16g00480 CCT
Cpe04g00768 Cpe05g01484 CCT
Cpe04g00768 Cpe15g00794 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00768 Cpe-Chr4:7384328 Cpe14g00830 Cpe-Chr14:6723905 8.30E-147 dispersed
Cpe19g00135 Cpe-Chr19:1057562 Cpe04g00768 Cpe-Chr4:7384328 3.60E-106 dispersed
Cpe15g00794 Cpe-Chr15:8009641 Cpe04g00768 Cpe-Chr4:7384328 0 wgd
Cpe04g00768 Cpe-Chr4:7384328 Cpe05g01484 Cpe-Chr5:10246340 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00768 - - csv:101204594 849.736