Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00778 ATGGATGAATCTCTGCTCGGTGTAGAAAGTAGCAGCAGCTCCAGCTCCCGACGTCAGATTCCTCATGTGAAGTTCAAACGCCGCTCTGACGCCATCGCTTATGGCTCTGCGTACCAAAGAGCTGCTGCACTTGTGGATCTGGCTGAAGATGGCGTTGGTATACCCGAGAAAATCCTTGATCAGTCGAACTTTCAGAGTGCTGCAAAGCTCTACTTCATTTTTATTAAATTTGATTTGATTTGGTCTGTAAATTTCTTTGCGCTGATAGTCCTAAATTTCTTTGAGAAACCCTTGTGGTGCTCCAAACACGATACGCATTCTTGTAACGACAGAGAGTATTTCTTTCTTGGGCAGTTGCCTTACTTAACAGCTGTTGAATCTCTTATATATGAGGCTGTGACTCTCATAATACTCATGATACACACTTTTTTCCCAATTTCGTTTGAAGGAGCCCAGCTTTATTGGAAAAATCCCTTGAACCAGTTGAAGGTCATATGCTTAATTATTTTGGTGGCCGATTTTCTCATTTATACCCTATATTTGTCGCCAGTGGCCTTTGATTATCTTCCATTCAGAGTTGCACCATATATTAGAGTTGTCTTTTTCATCATGAATATCAGGCATCTACGGGAGAGCATCATCATTCTAGCTGGAATGCTTGGCACATACTTGAATGTTTTGGCTCTATGGTTTTTGTTTCTTCTGTTTTCCAGCTGGTTGGCATACGTTATTTTTGAGGATACACAGCAGGGGAAATTATTATTTACTTCTTTTGGAGCCACATTATATCAAATGTTTATTTTGTTCACAACATCTAATAATCCAAATGTTTGGATACCTGCCTACAAGGCATCTCGTTGGTATTGCCTCTTTTTTGTTCTTTACGTGCTGTTGGGAGTTTATTTCGTTACAAACTTGATTCTTGCTGTTGTATACGATAGCTTTAAGAGTCAGCTGGCTAAACAAATTTCTGAGATGGACCGCTTGAGGAAAAGTATATTGGCCAAAGCATTTAGTCTTATGGATACTGATAACGTTGGGTTTATCAATAAACAGCAGTGCCTTATACTTCTTGAAGAACTTAACAGATACAGGACTTTGCCGAAGATATCAAGGGATGATTATGAGTTAATATTTGATGAGCTGGATGACAGTCGTGATTTTAAGATCAATATGAATGAGTTTGCTGATCTTTGCAATGCTATAGCCTTGAAGTTTCAGAAGGAGGACATTCCTTCAGTGTTTGAAGCGTATCCTTCGATCTACGATTCAGTTTCTTCAAAAAAGTTGAAAGCATTTGTGCGGAGCCCCTCATTTGGATATGCTATATCCTTTATCCTCATACTGAACCTGGTTGCTGTTATTATTGAAACAACACTCGATATAGAAAACAATGTTGGACAGAAAGCATGGCAAGAACTCGAGTTTGTATTTGGTTGGATATATGTGGTTGAAATGGCTCTAAAAATCTACGCGTTTGGATTTATGAATTATTGGAGAGATGGCCAAAATCAGTTTGATTTCCTTGTCACATGGATTATAGGCAAGTACTGTAAACCTTCATTGATTGGAGAAACCATGACTTTTGTGGCACCTAGTGGACTAACTTTTCTTTCAAATGGAGAATGGATTCGCTACCTTCTGATAGCAAGAATGTTACGCCTGATAAGGCTCCTAATGCATGTCCGGCAATATCGAGCATTTCTTGCTACCTTTTTAACTCTCATCCCTAGCTTGATGCCATATCTAGGAACTATTTTCTGTGTCCTCTGTCTTTATTGCACTCTTGGTGTGCAGGTCTTTGGAGGACTTGTTAACGCTGGAAATCCTGCTTTGTCTAAGACTGATCTGGATGATGATGACTACCTACTTTTCAATTTCAACGACTATCCTAATGGCATGGTGACACTGTTCAATTTGCTAGTTATGGGAAACTGGCAAGACTGGATGCAGAGCTACAAGGAGTTAACAGGAAGTATTTGGAGCCACGTTTATTTCATCAGTTTCTACCTAATAACCGTTTTGCTGCTCTTGAATTTGGTTGTAGCTTTTGTCTTGGAGGCTTTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGTGAAGAACAGGAACAGGACGCAGATAGTAGAAAGGATCGTCGACGTTTCGTCGGCACAAAAACTAGTAGCCGCAAAGTTGACATTCTTCTCCATCATATGTTGAGTGCAGAATTGGATGTAAAGGATTCCGATTAG 2238 39.63 MDESLLGVESSSSSSSRRQIPHVKFKRRSDAIAYGSAYQRAAALVDLAEDGVGIPEKILDQSNFQSAAKLYFIFIKFDLIWSVNFFALIVLNFFEKPLWCSKHDTHSCNDREYFFLGQLPYLTAVESLIYEAVTLIILMIHTFFPISFEGAQLYWKNPLNQLKVICLIILVADFLIYTLYLSPVAFDYLPFRVAPYIRVVFFIMNIRHLRESIIILAGMLGTYLNVLALWFLFLLFSSWLAYVIFEDTQQGKLLFTSFGATLYQMFILFTTSNNPNVWIPAYKASRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLAKQISEMDRLRKSILAKAFSLMDTDNVGFINKQQCLILLEELNRYRTLPKISRDDYELIFDELDDSRDFKINMNEFADLCNAIALKFQKEDIPSVFEAYPSIYDSVSSKKLKAFVRSPSFGYAISFILILNLVAVIIETTLDIENNVGQKAWQELEFVFGWIYVVEMALKIYAFGFMNYWRDGQNQFDFLVTWIIGKYCKPSLIGETMTFVAPSGLTFLSNGEWIRYLLIARMLRLIRLLMHVRQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVFGGLVNAGNPALSKTDLDDDDYLLFNFNDYPNGMVTLFNLLVMGNWQDWMQSYKELTGSIWSHVYFISFYLITVLLLLNLVVAFVLEAFFAELDIESSENGEEQEQDADSRKDRRRFVGTKTSSRKVDILLHHMLSAELDVKDSD 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7428931 7443351 + Cp4.1LG04g03140.1 Cpe04g00778 468340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00778 745 Pfam Ion transport protein 135 318 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe04g00778 745 Pfam Ion transport protein 437 689 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe04g00778 745 SUPERFAMILY EF-hand 325 418 IPR011992 -
Cpe04g00778 745 SUPERFAMILY Voltage-gated potassium channels 436 689 - -
Cpe04g00778 745 MobiDBLite consensus disorder prediction 1 19 - -
Cpe04g00778 745 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 742 IPR044581 GO:0005245
Cpe04g00778 745 CDD EFh 334 398 IPR002048 GO:0005509
Cpe04g00778 745 Gene3D - 569 728 - -
Cpe04g00778 745 ProSiteProfiles EF-hand calcium-binding domain profile. 329 364 IPR002048 GO:0005509
Cpe04g00778 745 MobiDBLite consensus disorder prediction 1 21 - -
Cpe04g00778 745 Gene3D - 317 400 - -
Cpe04g00778 745 Gene3D - 208 316 - -
Cpe04g00778 745 SMART efh_1 333 361 IPR002048 GO:0005509
Cpe04g00778 745 SMART efh_1 374 402 IPR002048 GO:0005509
Cpe04g00778 745 Gene3D - 428 568 IPR027359 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00778 Cpe15g00806 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00806 Cpe-Chr15:8059019 Cpe04g00778 Cpe-Chr4:7428931 9.31E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00778 K16900 - csv:101206980 1297.34