Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00781 ATGTCTTCTTCTTCAATCACTCTGTTCTGCGCCGTAATTTCGATTCTGATCTCCATTTCCATCTCAGTCGCCGCTACAGAGTTCATCTTCAACACGAATTTCACTTCCACTAATACTCTGCTCTTCGGCAACGCCACCGTTGATTCATCTGTTCTTATTCTCACAAGGGATTCAACTTTCACCATCGGCCGTGCTCTATACCCTTCCAAAATCCCGATCCGTTTCTCCGATTCTTCTTTTTCCTTTGCAACTTCCTTCATCTTCTCCGTCACTCCACAGCCAAATCATCTCCCCGGCCATGGATTCGCCTTTCTCTTCACACCTTCTACTGGAATCAATGGCACGAGCTCGGCTCAGAATTTGGGGCTTTTCAATTTCACCACTAATGGTAACCCTAATAACCATGTCTTCGCTGTTGAGTTCGATTCCTTCCAAAATCAAGAGTTCAACGACTCGAATGATAACCATGTGGGTGTAGATTTGAATTCTCTTCAGTCTACTGCCTCATCTACAGCAGGGGTTTGGAATGAACATGGAGAATTCAAGGAGTTGAGGATCAACAATGGAGAAATTTATCAGGTTTGGATTGAATGCTTAAACTCTTTGGTTAATATTACAATGGCTGAATTGGGAATGAGAAAGCCTAGAAAACCATTGATATCTCTGTCTGTGAATTTCTCTGAATTGCTTTTGGATGAGATGTTTGTAGGATTTACAGCCTCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCATGGAGTTTTAGTACCTCTAATTTGTCAATTGGTGATGCTTTAGTAAGAACGAATTTGCCATCATTTGCTCCTCATAATGACTCTATTTTTAACTCAATAGCTTTCATTGTGGGGATAATTGTGGGTGGTTCTGGGCTTGTGATCATCTGTTGTATTGTGGTCTATGTTCTTGTAATTATCAAAAGAAGGGGAACAAAGAAACCAATGGATGATGATATTGAAGATTGGGAGTTGGAATATTGGCCTCATCGGTTTGCTTATGATGATGTTTATGCAGCAACTGATGGGTTCTCAGAGGCCAATGTTGTTGGCTTTGGGCGTAATGGAATGGTCTATAAAGGGGAATTAGGGAGATCAAAGGTTGCTGTGAAGAAAATCTCTGTTGAAACTGAGTGTGGAATGAGGGAGTTTATGGCTGAGATTTCGAGTCTCAGACGATTAAAACATAGAAATTTAGTGAAACTTTTAGGATGGTGTAAGAAAGAGAAGGGAAGCTTGATCTTAATGTATGAATTCATGGAAAATGGAAGTTTAGACAAGAAGTTGTTCGAGTGTGATGAGAATACGACGCTGAGTTGGGAGAAAAGGATGAAGGTTTTGAGCGATGTAGCGACGGGGCTGCTATATCTGCATCAAGGTTGGGATTACAAGGTTATACATAGTGACGTTAAAGCAAACAACGTGCTACTCGACAAGGACATGAACGCAAGGTTAGGAGACTTCGGGTTGGCTCGAATGCAACCCAACAAGAGAATGGTAGACAAAAAGCGAGTGGTGGGAACTGTTGGGTACTTGGCGCCGGAGGTGGTTCGAACAGGACGAGTATCGATGCAAGGCGACGTTTTCGGGTTCGGGGTGTTGGTTTTGGAGGTGGTTTGTGGGCGGAGAGCGATGGAAGAAGGGAAGCCATTGTTGGTAGATTGGGTGAGAGGAGTAATGGAGAGGAATGAGCTGGTAGTGGCTGTTGATGAGAGATTGAAAGTTGAAGAGGTTGGAGAAGAGATTGATGAAATGGAGAGAATGGTTTGTTTGGGATTATTATGTGCACATCCTGAGGCTGGTGCAAGGCCAACAATGCAACAAGTTATGAACATTTTGGGTGAGATAAACGGAGATAACTCAAATCATCGAACGTTTAAACAAATCAAAACATCTTCTTCTTCAACATCCTTCGTTGAATCAGACGTTTTAAAGAGTGGTCGCTAG 1965 42.34 MSSSSITLFCAVISILISISISVAATEFIFNTNFTSTNTLLFGNATVDSSVLILTRDSTFTIGRALYPSKIPIRFSDSSFSFATSFIFSVTPQPNHLPGHGFAFLFTPSTGINGTSSAQNLGLFNFTTNGNPNNHVFAVEFDSFQNQEFNDSNDNHVGVDLNSLQSTASSTAGVWNEHGEFKELRINNGEIYQVWIECLNSLVNITMAELGMRKPRKPLISLSVNFSELLLDEMFVGFTASTGQLVQSHKILSWSFSTSNLSIGDALVRTNLPSFAPHNDSIFNSIAFIVGIIVGGSGLVIICCIVVYVLVIIKRRGTKKPMDDDIEDWELEYWPHRFAYDDVYAATDGFSEANVVGFGRNGMVYKGELGRSKVAVKKISVETECGMREFMAEISSLRRLKHRNLVKLLGWCKKEKGSLILMYEFMENGSLDKKLFECDENTTLSWEKRMKVLSDVATGLLYLHQGWDYKVIHSDVKANNVLLDKDMNARLGDFGLARMQPNKRMVDKKRVVGTVGYLAPEVVRTGRVSMQGDVFGFGVLVLEVVCGRRAMEEGKPLLVDWVRGVMERNELVVAVDERLKVEEVGEEIDEMERMVCLGLLCAHPEAGARPTMQQVMNILGEINGDNSNHRTFKQIKTSSSSTSFVESDVLKSGR 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7448701 7450665 + Cp4.1LG04g03160.1 Cpe04g00781 468343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00781 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Cpe04g00781 654 SUPERFAMILY Protein kinase-like (PK-like) 325 619 IPR011009 -
Cpe04g00781 654 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 16 630 - -
Cpe04g00781 654 Pfam Legume lectin domain 26 260 IPR001220 GO:0030246
Cpe04g00781 654 Gene3D Phosphorylase Kinase; domain 1 335 425 - -
Cpe04g00781 654 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Cpe04g00781 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 261 IPR013320 -
Cpe04g00781 654 PANTHER - 16 630 - -
Cpe04g00781 654 Gene3D Transferase(Phosphotransferase) domain 1 426 645 - -
Cpe04g00781 654 Pfam Protein kinase domain 351 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00781 654 CDD lectin_legume_LecRK_Arcelin_ConA 26 259 IPR001220 GO:0030246
Cpe04g00781 654 ProSiteProfiles Protein kinase domain profile. 350 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00781 654 Gene3D - 24 269 - -
Cpe04g00781 654 Coils Coil 574 594 - -
Cpe04g00781 654 SMART serkin_6 350 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00781 Cpe16g00777 CCT
Cpe04g00781 Cpe05g01500 CCT
Cpe04g00781 Cpe16g00777 ECH
Cpe04g00781 Cpe05g01500 ECH
Cpe04g00781 Cpe15g00808 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00781 Cpe-Chr4:7448701 Cpe10g00899 Cpe-Chr10:5048944 1.07E-142 dispersed
Cpe15g00808 Cpe-Chr15:8086557 Cpe04g00781 Cpe-Chr4:7448701 0 wgd
Cpe20g00435 Cpe-Chr20:2503213 Cpe04g00781 Cpe-Chr4:7448701 0 wgd
Cpe04g00781 Cpe-Chr4:7448701 Cpe09g00840 Cpe-Chr9:7766419 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62347 PF00069 Pkinase 1.80E-42 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00781 - - csv:101216388 970.689