Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00787 ATGGCTTCATCCAGAGAGCGCGAGAACTTCGTTTACATCGCTAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTGGAGGAAAGAAATTTACTCTCTGTTGGGTACAAGAATGTGGTTGGTGCAAGGAGAGCCTCATGGAGGATTTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAACAAATGCCAAGCGCATCAAGGAGTACAGACAAAAGGTTGAAACAGAGCTCTCTGGTATTTGTACTGATATCATGACAGTGATTGACGAACACCTAATTCCCTCTGCTTCAGCTGGGGAATCAACAGTGTTCTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACTAGCTCAGCCGAATCTGAATTGCCTCCTACACATCCTATCCGCTTGGGTTTGGCATTAAATTTCTCTGTCTTCTATTATGAAATCCTGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCTTTTGATGGAGCCATCTCCGAACTTGACACCCTCAATGAGGAGTCTTACAAAGACAGCACCTTAATCATGCAGCTTCTTAGAGACAACCTCACATTGTGGACTTCTGACATCCCAGAGGATGGAGATGATGCCCAAAAGGTCAACGGCATCGTCAAAGTTGCCGGTGGCGATGATGAGTGA 783 44.06 MASSRERENFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNETNAKRIKEYRQKVETELSGICTDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDGAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKVNGIVKVAGGDDE 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7486248 7490292 - Cp4.1LG04g02900.1 Cpe04g00787 468349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00787 260 Coils Coil 13 33 - -
Cpe04g00787 260 Gene3D - 1 250 IPR036815 -
Cpe04g00787 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Cpe04g00787 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Cpe04g00787 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Cpe04g00787 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Cpe04g00787 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Cpe04g00787 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Cpe04g00787 260 Pfam 14-3-3 protein 14 235 IPR023410 -
Cpe04g00787 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Cpe04g00787 260 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 3 246 - -
Cpe04g00787 260 PIRSF 14-3-3 1 247 IPR000308 -
Cpe04g00787 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Cpe04g00787 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Cpe04g00787 260 SMART 1433_4 7 248 IPR023410 -
Cpe04g00787 260 PANTHER 14-3-3 PROTEIN 3 246 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01502 Cpe-Chr1:8963226 Cpe04g00787 Cpe-Chr4:7486248 3.82E-147 dispersed
Cpe02g00372 Cpe-Chr2:2049866 Cpe04g00787 Cpe-Chr4:7486248 4.29E-123 dispersed
Cpe04g00787 Cpe-Chr4:7486248 Cpe07g00087 Cpe-Chr7:421056 5.21E-147 dispersed
Cpe15g00838 Cpe-Chr15:8262657 Cpe04g00787 Cpe-Chr4:7486248 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00787 K06630 - csv:101208446 483.796