Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00795 ATGGAAGTCGACGAAGAGTACCGAAGAAAAGAGCAACTCGTTCTTGTGGCAATTGTTGTACTCGCTTCCCTGGCTCTCGTTTCTTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGGTCTCTAAACGCCTCAAAATCCGCAAAAGGGATGATCTTGAGAAGGGAGGTAGTTTTGACAATGTTAAAGAATTTTCCACCGAGAAAGGCCTCCAAGTGTTCACCTTCAAGCAGCTATACTCAGCTACCTGTGGCTTTAGCAAGTCAAATGTGGTCGGGCACGGTAGCTTTGGATATGTATACCGAGGAGTTCTCAACGATGGGAGAAAGGTTGCGATTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGACTTCATTCGCCATATTTGTTGGCCTTGATCGGGTATTGCTCTAATAGCAATCATAAATTGCTGGTGTACGAGTTCATGGCTAATGGCGGTCTGCAAGAACATCTGTATCCTGTTAGCAGTGAGTATGCGCTAACAGGGCATTTGACAACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTTACAGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAAAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAATACTCCATGAAGGATGTTGTTCAAGTTGCAGCCATAGCCGCAATGTGTGTTCAACCAGAGGCAGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCACTGGTGAGAAATTACAGGACAGCTTCAAAGATCGGTAGCGGTTCTAGTTCCAGCGCTACCAAGTCGCCTGTGGCGCACGACAAGGCTAGTTCGGAAGACTGA 945 47.09 MEVDEEYRRKEQLVLVAIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRDDLEKGGSFDNVKEFSTEKGLQVFTFKQLYSATCGFSKSNVVGHGSFGYVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALIGYCSNSNHKLLVYEFMANGGLQEHLYPVSSEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTASKIGSGSSSSATKSPVAHDKASSED 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7541236 7544905 + Cp4.1LG04g02980.1 Cpe04g00795 468357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00795 314 Gene3D Transferase(Phosphotransferase) domain 1 163 302 - -
Cpe04g00795 314 PANTHER OS01G0750732 PROTEIN 3 176 - -
Cpe04g00795 314 MobiDBLite consensus disorder prediction 290 314 - -
Cpe04g00795 314 PANTHER OS01G0750732 PROTEIN 176 311 - -
Cpe04g00795 314 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Cpe04g00795 314 ProSiteProfiles Protein kinase domain profile. 88 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00795 314 Pfam Protein tyrosine and serine/threonine kinase 178 279 IPR001245 GO:0004672|GO:0006468
Cpe04g00795 314 Pfam Protein tyrosine and serine/threonine kinase 91 173 IPR001245 GO:0004672|GO:0006468
Cpe04g00795 314 PANTHER OS07G0227300 PROTEIN 3 176 - -
Cpe04g00795 314 SUPERFAMILY Protein kinase-like (PK-like) 71 277 IPR011009 -
Cpe04g00795 314 MobiDBLite consensus disorder prediction 290 306 - -
Cpe04g00795 314 Gene3D Phosphorylase Kinase; domain 1 51 162 - -
Cpe04g00795 314 PANTHER OS07G0227300 PROTEIN 176 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00143 Cpe-Chr4:1357676 Cpe04g00795 Cpe-Chr4:7541236 4.53E-56 dispersed
Cpe04g00795 Cpe-Chr4:7541236 Cpe05g00096 Cpe-Chr5:464659 6.46E-65 dispersed
Cpe18g00074 Cpe-Chr18:1873132 Cpe04g00795 Cpe-Chr4:7541236 1.16E-31 dispersed
Cpe15g00828 Cpe-Chr15:8213193 Cpe04g00795 Cpe-Chr4:7541236 9.48E-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62348 PF07714 PK_Tyr_Ser-Thr 1.00E-06 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00795 - - csv:101204636 304.679