Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00803 ATGATTTCGAGATCGTACACAAATCTTTTAGATTTAGCGTCTGGAAATTTTCCAGCAATGGAAGTGAAACGGAAGCGGTTTCCACGGATCATGACTGTTCCAGGCGATGTAGGCGAGCTTGACGACGATCAGGCCTACAGCGTGACATCCGAAAATCCATCATCAATTTCCTCAGATCGGATGATAATTGTAGCAAACCAGCTTCCATTAAGAGCAAAACGAAGGGAAAATGACAATTCCTGGAGTTTCAATTGGAACGAAGATTCATTGCTTTTGCAGCTTAAAAGTGGTTTGCCAGAGGATATGGAGATTCTTTATGTTGGTTCTTTGAAAGTGGATATCCAACCAGACGAACAAGATGAGGTCTCCCAGGTTTTGTTGGAGAAATTTAAGTGTATTCCTACGTTTTTGCCTCCTCATGTTTTGGAAAAGTTCTATGATGGGTTCTGCAAGAGGCATTTGTGGCCTCTTTTTCATTATATGTTGCCATATTCTGCTGATCAGAAGGGTCGATTTGATCGCTCGATGTGGGAAGCTTATGTATCAGCAAATAAGCTGTTCTTCCAGAAAGTGGTTGAGGTGATCAACCCAGATGATGACTATATTTGGATCCATGATTACCATTTGATGGTAATGCCCACGTTCTTGAGGAGGCGTTTTAACAGAGTTAAGATGGGATTTTTCCTTCATAGTCCATTTCCTTCATCTGAGATCTACCGTACCCTTCCTGTTAGAGAAGAGATTCTCAAGGCATTACTTAACTCTGATATCATTGGATTTCACACTTTCGATTACGCTCGTCATTTCCTTTCGTGTTGCAGCCGAATGTTGGGTTTGGAGTATCAGTCGAAGAGGGGCTATCTTGGATTGGAATACTACGGGAGGACGATCGGGATAAAGATAATGCCTGTTGGAATTCATATGACTCGGATCGAGTCGGTGATGAGACTGGCAGACAAGGATGTTAAGACTAGGGAACTCACGCAGCAATTTGCGGGGAAGACGGTGTTGCTAGGTGTCGATGACATGGACATTTTCAAAGGAATCAACCTGAAATTGTTAGCTATGGAACAGGTGCTTGAGCAACATCCAAAGTGGCAGGGGAAGGCCGTACTGGTCCAAATTGTAAATCCTGCCAGAGGCAAGGGAAGGGATTTGGAAGAAATAGAAGTTGAAATAAAAGAAAGTTGCAGAAGGATTAACAAGGAATATGGGGATTCTGGCTATGAGCCGATAGTACTTCTGGATAGGCATGTGCCAATTACGGAAAGGGTTGCTTATTATAGCATTGCGGAGTGCGTAGTTGTCACTGCTGTTCGAGATGGGATGAACTTAACTCCGTATGAGTACGTTGTCTGCAGACAGGGAATATCCTCCCAAGAAAGTTCGAACTTCCACGGACCGAAAAAGAGCATGCTTGTCATATCCGAGTTTATTGGATGTTCTCCATCACTAAGTGGAGCATTTCGTATCAACCCATGGAATGTCGAACGGACAGCAGAGGCTTTGAATGAAGCAATCTCAATGGCTGATACGGAGAAGCAATTGCGACATGAGAAGCATTACCGTTATGTTGCTACTCACGATGTCGCTTATTGGTCTCGTAGTTTCTTGCAAGATATGGAGAGAACTTGCTCAGATCATTTCAGGAGACGATGTTGGGGAATTGGTTTTAGTTTCGGTTTCAGGGTTGTAGCTCTTGATCCCAATTTCAGAAAACTTTCAGTAGATTCCATTTTATCAGCTTACAGTAAGGCCGAAAGTCGGGCCATTCTTTTGGACTACGATGGCACCGTGATGCCTCAAAACTCCATAAATAAGTCGCCGAGTCAGCAGGTTATCTCTATCCTTAACACGCTTTGTGCAGATTCAAAAAATGTAGTCTTCATTGTGAGTGGACGTGGGAGGGACAGCTTAAGCAAGTGGTTTCGCCCTTGCAAGAAGCTTGGAATTGCAGCAGAACATGGATATCTTTTGAGGCAGTCACAGGACGAGGAGTGGAAGATCTGCGGCCAAAGTTCTGATTTCGGGTGGATGCAGATTGCTGAACCTGTTATGAACTTATATACGGAGGCTACAGATGGTTCATCTATTGAAAGAAAGGAAAGTGCCTTGGTCTGGCAATATAGAGATGCAGATCCTGGTTTTGGATCTTCCCAGGCTAAGGAGATGTTGGATCATTTAGAGAGTGTTTTGGCAAACGAACCCGTTGCAGTCAAAAGCGGTCAATTCATCGTCGAAGGGGTTACCAAAGGCTTGGTAGCTGAAAAGATTTTCTCAACAATGGCGGGGGATGGAAAACTTGCTGACTTTGTGTTGTGTATTGGCGACGACAGATCCGATGAGGACATGTTTGAAATAATTGGTAATGCATTGTCCAGTAATATTCTTTCTCCTTCGACGTCGGTTTTTGCCTGCACTGTTGGACAGAAGCCGAGCAAAGCGAAATATTATTTAGACGACACAGCTGAAGTGATAAGCATGCTAGAATACCTCGCCGAAGCTTCTAGCCCGTTGCCATCCTCCGACAATGAAGATGGTGAAAACGCTTCCTGA 2556 43.94 MISRSYTNLLDLASGNFPAMEVKRKRFPRIMTVPGDVGELDDDQAYSVTSENPSSISSDRMIIVANQLPLRAKRRENDNSWSFNWNEDSLLLQLKSGLPEDMEILYVGSLKVDIQPDEQDEVSQVLLEKFKCIPTFLPPHVLEKFYDGFCKRHLWPLFHYMLPYSADQKGRFDRSMWEAYVSANKLFFQKVVEVINPDDDYIWIHDYHLMVMPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMTRIESVMRLADKDVKTRELTQQFAGKTVLLGVDDMDIFKGINLKLLAMEQVLEQHPKWQGKAVLVQIVNPARGKGRDLEEIEVEIKESCRRINKEYGDSGYEPIVLLDRHVPITERVAYYSIAECVVVTAVRDGMNLTPYEYVVCRQGISSQESSNFHGPKKSMLVISEFIGCSPSLSGAFRINPWNVERTAEALNEAISMADTEKQLRHEKHYRYVATHDVAYWSRSFLQDMERTCSDHFRRRCWGIGFSFGFRVVALDPNFRKLSVDSILSAYSKAESRAILLDYDGTVMPQNSINKSPSQQVISILNTLCADSKNVVFIVSGRGRDSLSKWFRPCKKLGIAAEHGYLLRQSQDEEWKICGQSSDFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEGVTKGLVAEKIFSTMAGDGKLADFVLCIGDDRSDEDMFEIIGNALSSNILSPSTSVFACTVGQKPSKAKYYLDDTAEVISMLEYLAEASSPLPSSDNEDGENAS 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7586345 7589279 + Cp4.1LG04g02790.1 Cpe04g00803 468365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00803 851 Gene3D - 719 845 IPR023214 -
Cpe04g00803 851 Gene3D - 588 689 IPR023214 -
Cpe04g00803 851 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 844 - -
Cpe04g00803 851 Pfam Trehalose-phosphatase 592 822 IPR003337 GO:0003824|GO:0005992
Cpe04g00803 851 Gene3D Glycogen Phosphorylase B; 314 526 - -
Cpe04g00803 851 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 545 - -
Cpe04g00803 851 SUPERFAMILY HAD-like 589 833 IPR036412 -
Cpe04g00803 851 CDD HAD_TPP 590 825 - -
Cpe04g00803 851 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 844 IPR001830 GO:0003824|GO:0005992
Cpe04g00803 851 CDD GT20_TPS 60 542 IPR001830 GO:0003824|GO:0005992
Cpe04g00803 851 TIGRFAM T6PP: trehalose-phosphatase 587 833 IPR003337 GO:0003824|GO:0005992
Cpe04g00803 851 Pfam Glycosyltransferase family 20 60 542 IPR001830 GO:0003824|GO:0005992
Cpe04g00803 851 Gene3D Glycogen Phosphorylase B; 53 313 - -
Cpe04g00803 851 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 591 791 IPR006379 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00803 Cpe15g00820 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00803 Cpe-Chr4:7586345 Cpe08g00861 Cpe-Chr8:6802020 0 dispersed
Cpe10g00131 Cpe-Chr10:838756 Cpe04g00803 Cpe-Chr4:7586345 0 wgd
Cpe15g00820 Cpe-Chr15:8155545 Cpe04g00803 Cpe-Chr4:7586345 0 wgd
Cpe19g01083 Cpe-Chr19:7365597 Cpe04g00803 Cpe-Chr4:7586345 0 wgd
Cpe04g00803 Cpe-Chr4:7586345 Cpe09g00783 Cpe-Chr9:7260120 2.23E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00803 K16055 - csv:101209914 1630.15