Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe04g00809 | ATGACCACCGGAAGAGAAATCCTCCACAAAATGAAGGTGAAGGCAGGGTTTGGTTCTTCGGCGCCGGACACTGCTGCGAAAGGGAAGGCCAAAGCGACCAAGAATCACATAAGCCATGGCAGCCATTTGGTTAAGGGCAAAACCAACCACCCCATGGAAGATTACTTAGTCACTGATTTCAAGCGCGTCAAGGACCATGAGTTGGGTTTGTTTGCCATTTTCGACGGCCATTTAGGCCATGATGTTGCCAATTTCTTGCAGAATAATCTCTTTGATAATATCCTCAAACAGGCTGATTTCTGGAGCGAAACGAGAAAGGCCATCAAAAGAGCGTACAAGAAAACCGACGATGAAATATTGGATAAAGTAAAGCAGCTGGGAAGAGGAGGATCGACGGCGGTAACCGCCATATTGATCGACGGCCACAAACTCGTCGTTGCCAACGTCGGAGATTCCAGAGCCGTTCTTTGCAAAAACGGCGTCGCTGAGCAGCTTTCCGTTGACCACGAACCCAGTAAAGAAAAAAGGGATATTGAAAGCCGTGGAGGCTTCGTATCAAATCTTCCAGGCGATGTGCCACGTGTCGACGGACAATTGGCTGTTGCCAGAGCATTTGGTGATAAGAGCTTGAAACTCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTGGATGAATCTACAGAGTTCATGATTTTGGCTAGCGATGGCATTTGGAAGGTAATGACAAACAAAGAGGCGGTGGAATCTATTAGACACATAAAGGATGCGAACGTGGCAGCCAAACGACTTATCGATGAAGCAGTATCCAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCAGTGA | 861 | 47.39 | MTTGREILHKMKVKAGFGSSAPDTAAKGKAKATKNHISHGSHLVKGKTNHPMEDYLVTDFKRVKDHELGLFAIFDGHLGHDVANFLQNNLFDNILKQADFWSETRKAIKRAYKKTDDEILDKVKQLGRGGSTAVTAILIDGHKLVVANVGDSRAVLCKNGVAEQLSVDHEPSKEKRDIESRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDVEVKTVDESTEFMILASDGIWKVMTNKEAVESIRHIKDANVAAKRLIDEAVSRKSKDDISCIVVRFQ | 286 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 7626449 | 7627955 | - | Cp4.1LG04g02760.1 | Cpe04g00809 | 468371 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe04g00809 | 286 | PANTHER | PROTEIN PHOSPHATASE 2C 39-RELATED | 3 | 286 | - | - | |
| Cpe04g00809 | 286 | ProSiteProfiles | PPM-type phosphatase domain profile. | 38 | 285 | IPR001932 | - | |
| Cpe04g00809 | 286 | PANTHER | PROTEIN PHOSPHATASE 2C | 3 | 286 | IPR015655 | GO:0004722|GO:0006470 | |
| Cpe04g00809 | 286 | SMART | PP2C_SIG_2 | 43 | 285 | IPR001932 | - | |
| Cpe04g00809 | 286 | CDD | PP2Cc | 37 | 285 | IPR001932 | - | |
| Cpe04g00809 | 286 | SUPERFAMILY | PP2C-like | 34 | 285 | IPR036457 | - | |
| Cpe04g00809 | 286 | MobiDBLite | consensus disorder prediction | 19 | 44 | - | - | |
| Cpe04g00809 | 286 | Pfam | Protein phosphatase 2C | 49 | 278 | IPR001932 | - | |
| Cpe04g00809 | 286 | SMART | PP2C_4 | 28 | 283 | IPR001932 | - | |
| Cpe04g00809 | 286 | Gene3D | - | 15 | 286 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe04g00809 | Cpe-Chr4:7626449 | Cpe06g00680 | Cpe-Chr6:4218014 | 3.15E-134 | dispersed | |
| Cpe12g00132 | Cpe-Chr12:833609 | Cpe04g00809 | Cpe-Chr4:7626449 | 2.82E-41 | dispersed | |
| Cpe17g00201 | Cpe-Chr17:1306699 | Cpe04g00809 | Cpe-Chr4:7626449 | 6.51E-39 | dispersed | |
| Cpe04g00809 | Cpe-Chr4:7626449 | Cpe14g00210 | Cpe-Chr14:1175110 | 4.34E-109 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe04g00809 | K17506 | - | csv:101211399 | 496.123 |