Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00809 ATGACCACCGGAAGAGAAATCCTCCACAAAATGAAGGTGAAGGCAGGGTTTGGTTCTTCGGCGCCGGACACTGCTGCGAAAGGGAAGGCCAAAGCGACCAAGAATCACATAAGCCATGGCAGCCATTTGGTTAAGGGCAAAACCAACCACCCCATGGAAGATTACTTAGTCACTGATTTCAAGCGCGTCAAGGACCATGAGTTGGGTTTGTTTGCCATTTTCGACGGCCATTTAGGCCATGATGTTGCCAATTTCTTGCAGAATAATCTCTTTGATAATATCCTCAAACAGGCTGATTTCTGGAGCGAAACGAGAAAGGCCATCAAAAGAGCGTACAAGAAAACCGACGATGAAATATTGGATAAAGTAAAGCAGCTGGGAAGAGGAGGATCGACGGCGGTAACCGCCATATTGATCGACGGCCACAAACTCGTCGTTGCCAACGTCGGAGATTCCAGAGCCGTTCTTTGCAAAAACGGCGTCGCTGAGCAGCTTTCCGTTGACCACGAACCCAGTAAAGAAAAAAGGGATATTGAAAGCCGTGGAGGCTTCGTATCAAATCTTCCAGGCGATGTGCCACGTGTCGACGGACAATTGGCTGTTGCCAGAGCATTTGGTGATAAGAGCTTGAAACTCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTGGATGAATCTACAGAGTTCATGATTTTGGCTAGCGATGGCATTTGGAAGGTAATGACAAACAAAGAGGCGGTGGAATCTATTAGACACATAAAGGATGCGAACGTGGCAGCCAAACGACTTATCGATGAAGCAGTATCCAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCAGTGA 861 47.39 MTTGREILHKMKVKAGFGSSAPDTAAKGKAKATKNHISHGSHLVKGKTNHPMEDYLVTDFKRVKDHELGLFAIFDGHLGHDVANFLQNNLFDNILKQADFWSETRKAIKRAYKKTDDEILDKVKQLGRGGSTAVTAILIDGHKLVVANVGDSRAVLCKNGVAEQLSVDHEPSKEKRDIESRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDVEVKTVDESTEFMILASDGIWKVMTNKEAVESIRHIKDANVAAKRLIDEAVSRKSKDDISCIVVRFQ 286
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 7626449 7627955 - Cp4.1LG04g02760.1 Cpe04g00809 468371
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00809 286 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 3 286 - -
Cpe04g00809 286 ProSiteProfiles PPM-type phosphatase domain profile. 38 285 IPR001932 -
Cpe04g00809 286 PANTHER PROTEIN PHOSPHATASE 2C 3 286 IPR015655 GO:0004722|GO:0006470
Cpe04g00809 286 SMART PP2C_SIG_2 43 285 IPR001932 -
Cpe04g00809 286 CDD PP2Cc 37 285 IPR001932 -
Cpe04g00809 286 SUPERFAMILY PP2C-like 34 285 IPR036457 -
Cpe04g00809 286 MobiDBLite consensus disorder prediction 19 44 - -
Cpe04g00809 286 Pfam Protein phosphatase 2C 49 278 IPR001932 -
Cpe04g00809 286 SMART PP2C_4 28 283 IPR001932 -
Cpe04g00809 286 Gene3D - 15 286 IPR036457 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00809 Cpe-Chr4:7626449 Cpe06g00680 Cpe-Chr6:4218014 3.15E-134 dispersed
Cpe12g00132 Cpe-Chr12:833609 Cpe04g00809 Cpe-Chr4:7626449 2.82E-41 dispersed
Cpe17g00201 Cpe-Chr17:1306699 Cpe04g00809 Cpe-Chr4:7626449 6.51E-39 dispersed
Cpe04g00809 Cpe-Chr4:7626449 Cpe14g00210 Cpe-Chr14:1175110 4.34E-109 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00809 K17506 - csv:101211399 496.123