Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00827 | ATGCCACTCGATCACCACTCCCAACACTTCGATCAAACACGCAGTTCCGTCGAAGCCGATGATGATTCCGACCATCTCCACCCTACTCGTTCCACGACGTCTGTCGTCAATGGAGCCGACTGCGAGAATGCCGGCGATGACCTTTTCGTCCCTCCCCTGAACTTCGCCGTCGTTGACAATGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTACTTCTTGCAGACCTTAGGCCTTCGTTCGATTATATGTCTTTGTCCTGAGCCATATCCTGAGGCGAGCATGGATTTTCTCAAGTCGAATGGAATTCGATTGTTTCAACTCGGGATTGAAGGTACTAAGGAGCCTTTTGTGAACATTCCAGACAACACAATTCGTGAAGCACTTAAAATTATTCTCGATGTGAGGAATCGCCCAGTTCTAATCCATTGCAAACGAGGGAAGCACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGCTGCAGAAATGGTGCCTATCCTCAGTCTTTTATGAGTATCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGATGTTTCTGGCTTGAAGTATCTGCCATCTTCATTTTCTTGTTCCAAAAGATAA | 636 | 47.48 | MPLDHHSQHFDQTRSSVEADDDSDHLHPTRSTTSVVNGADCENAGDDLFVPPLNFAVVDNGIFRSGFPDSSNFYFLQTLGLRSIICLCPEPYPEASMDFLKSNGIRLFQLGIEGTKEPFVNIPDNTIREALKIILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFYEYQRFAAAKARVSDQRFIELFDVSGLKYLPSSFSCSKR | 211 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7718030 | 7721247 | - | Cp4.1LG04g02530.1 | Cpe04g00827 | 468389 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00827 | 211 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 144 | 154 | IPR016130 | GO:0016311|GO:0016791 | |
Cpe04g00827 | 211 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 18 | 116 | - | - | |
Cpe04g00827 | 211 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 117 | 210 | - | - | |
Cpe04g00827 | 211 | PRINTS | Plant and fungal dual specificity phosphatase signature | 49 | 66 | IPR020428 | GO:0016791 | |
Cpe04g00827 | 211 | PRINTS | Plant and fungal dual specificity phosphatase signature | 86 | 99 | IPR020428 | GO:0016791 | |
Cpe04g00827 | 211 | PRINTS | Plant and fungal dual specificity phosphatase signature | 105 | 119 | IPR020428 | GO:0016791 | |
Cpe04g00827 | 211 | PRINTS | Plant and fungal dual specificity phosphatase signature | 122 | 136 | IPR020428 | GO:0016791 | |
Cpe04g00827 | 211 | PANTHER | - | 18 | 116 | - | - | |
Cpe04g00827 | 211 | PANTHER | - | 117 | 210 | - | - | |
Cpe04g00827 | 211 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Cpe04g00827 | 211 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 49 | 195 | IPR029021 | - | |
Cpe04g00827 | 211 | CDD | PFA-DSP_Siw14 | 48 | 195 | - | - | |
Cpe04g00827 | 211 | Pfam | Tyrosine phosphatase family | 50 | 197 | IPR004861 | - | |
Cpe04g00827 | 211 | Gene3D | Protein tyrosine phosphatase superfamily | 48 | 198 | IPR029021 | - | |
Cpe04g00827 | 211 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Cpe04g00827 | 211 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 54 | 208 | IPR020422 | GO:0006470|GO:0008138 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00827 | Cpe-Chr4:7718030 | Cpe18g00256 | Cpe-Chr18:4212289 | 6.58E-74 | dispersed | |
Cpe15g00854 | Cpe-Chr15:8351458 | Cpe04g00827 | Cpe-Chr4:7718030 | 1.33E-74 | wgd | |
Cpe16g00749 | Cpe-Chr16:7535164 | Cpe04g00827 | Cpe-Chr4:7718030 | 6.30E-100 | wgd | |
Cpe04g00827 | Cpe-Chr4:7718030 | Cpe05g01529 | Cpe-Chr5:10530069 | 1.31E-104 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00827 | K18045 | - | csv:101209768 | 355.91 |