Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00845 ATGGCAAATCCGGCGAAGAAGCACGTCTTTCTCTTCTACTGCGCGGAATGCGAAGAACTTGCCCACAAAGTTGCTGCTCAATCCGATTCCATCACTCTTCAAACCATCAAATGGAGGACGTTTGATGATGGTTTTCCAAATATTTATATCAACAATGCTCAAGATCTACGCGGGAATCATGTAGCATTCCTTGCATCTTTCAGCCACCCAGGAGCCATCTTTGAACAGATATCAGTCATATACAATCTCCCCAGGCTTTTTTCTGCTTCATTCACCTTGGTATTGCCCTTCTTTCCTACTGGCTCCTTTGAGCGAATGGAAGAAGAAGGGGATGTAGCAACAGCATTTACCATGGCCAGGATCTTATCAAATATCCCTATTTCAAGAGGTGGCCCGACAAGCGTAGTTATCTATGATATTCATGCCTTGCAGGAAAGGTTTTACTTTGGGGATAATGTTTTGCCTTTGTTTGAAACTGGAATTCCACTCCTGAAGCAACGTCTGCGCCAACTTCCTGATGCTGACAATGTAGTTATAGCATTTCCAGATGATGGAGCTTGGAAACGATTCCACAAGCAACTCGATGGCTATCCTGTGGTCATCTGTACAAAAGTTCGGGAAGAAGACAAAAGGATAGTGCGGATCAAGGAAGGAGTCCCTGCTGGTTGTCACGTTGTTATCGTTGATGATTTGAAAGTTTTAGCAGCTCACGGTGCGGCCAAGGTTAGCGCATATGTTACTCATGGTGTTTTCCCAAAGCAATCATGGAATCGATTCCTTCACAAGAATGGTCTGGAGATAGCGTTTTCTCACTTCTGGATCACAGATTCCTGCCCTCACACAGTCAAAGCCATAGCAGATAAAGCTCCTTTTGAAGTTCTGAGTCTAGCAGCTTCCATTGCTGATGCTTTGTTGGGTTTAGGGCATTCATCCAGTAGGAATGCTAAAAGTTTCCATACTCGATCTGATTTTGGTTACTTTATGGTAGCCGGTGGTGTTGGTTGTTCTGGGTCGGTGATTGAGTTTCTGGTTCAGGTTTTGGGATTGCAGGTAGGGAAGTGTATGAGGGATTTGATTCGGGTAATTTTATTATGTTCCGTGGAGGATTCGGGAAGGAGCATAAGGAGGGATTGTGGGTTTGTGATCCGGAGCAGGGATTTTGTGTTCACTGTTCTCGACGAAGTTGGGTTTCAGAGTTTAGGGAAATGCAGACCAATCACCGATTCTGCAGAGTTGGACTTTTTCTCTGAATATGGCGATGCTAACAGATTCAAAATTCAGGAAGTTGTTGGGAAGGGGAGTTATGGAGTGGTTTGTTCAGCAGTCGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATAAATGATATTTTTGAACACCTATCGGATGCTGCTCGTATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGTCATCCTGATATTGTTGAAATCAAACACATTATGCTACCGCCTTCTCGTAGGGGGTTCAAAGATATCTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCTAATGATGATTTAACAACAAAGCACTATCAATTTTTCCTTTATCAGCTACTCCGTGCACTAAAATATATTCACGCAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATATGTGATTTTGGATTGGCTAGAGTTGCTTTCAGTGACACCCCGACAACAATATTTTGGACGGACTATGTTGCTACCAGATGGTATAGAGCTCCAGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTAACTGGAAAACCAATTTTTCCCGGTAAAAATGTTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACGCCTTCATTAGATACCATTTCTCGGGTAAGAAATGAGAAGGCTAGAAGGTACTTAGCTAGTATGAGGAAGAAGCAGCCCATTCTGTTTTCACAGAAGTTCCCAAATGCGGATCCTCTAGCCCTGCAATTACTGCAACGATTGCTTGCGTTTGATCCAAAGGATCGACCTACTGCAGAAGAGGCACTGGCAGATCCTTACTTTAAAGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAGAGGAGAAAGGTCACAAAGGACGACATTCGCGAGCTGATATTCCGGGAGATACTAGAATACCATCCTCAACTGCTGAAGGACTACTTAAATGGAACTGAGAGATCAAATTTTCTTTATCCAAGTGCACTCGATCAGTTCAAAAAACAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGCTTATCCTCTAGAAAGAAAGCATGCATCTCTTCCTAGGTCTTCGGTTCAGTCGAATACCATTCCTCCTAAAGCAACATCGAATATTGCTTCTTTTAAAGACCGATATGTGCCACCAGGGGCGTACAGCAACCGGCATTACAGAGATCCAGCTGCACAGAGGATTGCTGCAACTCAAGGTGAGCCTGGAAGAATATCAGGCCCGGTCATGCCATATGATAGTGGAAGTATCGCCAAGGATGCCTATGATCCAAGAAGGTTAATTAGAAGTGCCCTCCCTTCTCATGCTATCCATCCAACATATTATTACCAGCAATCTTGCGGCAAAAGTGAAGAATCATCAACAACAGGGGCTGAGAAAGACACTTCCTTGCACTGCAAACAAGCCCCTCAATGCGGAATGGCAGCCAAATTAACATCCGACACAGCAGCTACTGGTGCTTTCTCAAATCCTTTTTTTATGGCACGTGTAGGATTGCACAAGGCGGGAAACAATGACCGTGCTGCACGTGTGCAGGTAAACGCTCAATATGATACTGGAGCCGTTCCAGCTGCAACTGCCACCACCCATAGAAACACTGGCATGGTTGAGTATGGTATGACAAGAATGTATTAG 3015 43.55 MANPAKKHVFLFYCAECEELAHKVAAQSDSITLQTIKWRTFDDGFPNIYINNAQDLRGNHVAFLASFSHPGAIFEQISVIYNLPRLFSASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPISRGGPTSVVIYDIHALQERFYFGDNVLPLFETGIPLLKQRLRQLPDADNVVIAFPDDGAWKRFHKQLDGYPVVICTKVREEDKRIVRIKEGVPAGCHVVIVDDLKVLAAHGAAKVSAYVTHGVFPKQSWNRFLHKNGLEIAFSHFWITDSCPHTVKAIADKAPFEVLSLAASIADALLGLGHSSSRNAKSFHTRSDFGYFMVAGGVGCSGSVIEFLVQVLGLQVGKCMRDLIRVILLCSVEDSGRSIRRDCGFVIRSRDFVFTVLDEVGFQSLGKCRPITDSAELDFFSEYGDANRFKIQEVVGKGSYGVVCSAVDTLTNEKVAIKKINDIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTTKHYQFFLYQLLRALKYIHAANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPIFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLASMRKKQPILFSQKFPNADPLALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFREILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPAYPLERKHASLPRSSVQSNTIPPKATSNIASFKDRYVPPGAYSNRHYRDPAAQRIAATQGEPGRISGPVMPYDSGSIAKDAYDPRRLIRSALPSHAIHPTYYYQQSCGKSEESSTTGAEKDTSLHCKQAPQCGMAAKLTSDTAATGAFSNPFFMARVGLHKAGNNDRAARVQVNAQYDTGAVPAATATTHRNTGMVEYGMTRMY 1004
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7825050 7833528 - Cp4.1LG04g02390.1 Cpe04g00845 468407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00845 1004 SUPERFAMILY PRTase-like 176 308 IPR029057 -
Cpe04g00845 1004 MobiDBLite consensus disorder prediction 811 827 - -
Cpe04g00845 1004 ProSitePatterns Protein kinases ATP-binding region signature. 430 454 IPR017441 GO:0005524
Cpe04g00845 1004 SMART Pribosyltran_N_2 9 126 - -
Cpe04g00845 1004 Gene3D - 166 288 IPR029057 -
Cpe04g00845 1004 CDD PRTases_typeI 161 252 IPR000836 -
Cpe04g00845 1004 ProSitePatterns MAP kinase signature. 459 562 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe04g00845 1004 ProSiteProfiles Protein kinase domain profile. 424 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00845 1004 Gene3D Transferase(Phosphotransferase) domain 1 510 738 - -
Cpe04g00845 1004 MobiDBLite consensus disorder prediction 795 830 - -
Cpe04g00845 1004 SMART serkin_6 424 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00845 1004 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 408 859 - -
Cpe04g00845 1004 Pfam Protein kinase domain 425 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00845 1004 CDD STKc_TDY_MAPK 423 760 - -
Cpe04g00845 1004 Gene3D Phosphorylase Kinase; domain 1 439 761 - -
Cpe04g00845 1004 Gene3D - 7 165 IPR029057 -
Cpe04g00845 1004 SUPERFAMILY PRTase-like 7 169 IPR029057 -
Cpe04g00845 1004 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 408 859 - -
Cpe04g00845 1004 SUPERFAMILY Protein kinase-like (PK-like) 421 719 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00590 Cpe-Chr1:3410930 Cpe04g00845 Cpe-Chr4:7825050 0 dispersed
Cpe01g01559 Cpe-Chr1:9287541 Cpe04g00845 Cpe-Chr4:7825050 7.00E-151 dispersed
Cpe01g01561 Cpe-Chr1:9300513 Cpe04g00845 Cpe-Chr4:7825050 1.18E-20 dispersed
Cpe04g00845 Cpe-Chr4:7825050 Cpe12g00231 Cpe-Chr12:1545585 0 dispersed
Cpe15g00875 Cpe-Chr15:8476173 Cpe04g00845 Cpe-Chr4:7825050 1.17E-160 transposed
Cpe15g00873 Cpe-Chr15:8465383 Cpe04g00845 Cpe-Chr4:7825050 0 wgd
Cpe16g00730 Cpe-Chr16:7402300 Cpe04g00845 Cpe-Chr4:7825050 0 wgd
Cpe04g00845 Cpe-Chr4:7825050 Cpe05g01548 Cpe-Chr5:10632667 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62351 PF00069 Pkinase 6.30E-66 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00845 - - csv:101214068 1075.46