Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00845 | ATGGCAAATCCGGCGAAGAAGCACGTCTTTCTCTTCTACTGCGCGGAATGCGAAGAACTTGCCCACAAAGTTGCTGCTCAATCCGATTCCATCACTCTTCAAACCATCAAATGGAGGACGTTTGATGATGGTTTTCCAAATATTTATATCAACAATGCTCAAGATCTACGCGGGAATCATGTAGCATTCCTTGCATCTTTCAGCCACCCAGGAGCCATCTTTGAACAGATATCAGTCATATACAATCTCCCCAGGCTTTTTTCTGCTTCATTCACCTTGGTATTGCCCTTCTTTCCTACTGGCTCCTTTGAGCGAATGGAAGAAGAAGGGGATGTAGCAACAGCATTTACCATGGCCAGGATCTTATCAAATATCCCTATTTCAAGAGGTGGCCCGACAAGCGTAGTTATCTATGATATTCATGCCTTGCAGGAAAGGTTTTACTTTGGGGATAATGTTTTGCCTTTGTTTGAAACTGGAATTCCACTCCTGAAGCAACGTCTGCGCCAACTTCCTGATGCTGACAATGTAGTTATAGCATTTCCAGATGATGGAGCTTGGAAACGATTCCACAAGCAACTCGATGGCTATCCTGTGGTCATCTGTACAAAAGTTCGGGAAGAAGACAAAAGGATAGTGCGGATCAAGGAAGGAGTCCCTGCTGGTTGTCACGTTGTTATCGTTGATGATTTGAAAGTTTTAGCAGCTCACGGTGCGGCCAAGGTTAGCGCATATGTTACTCATGGTGTTTTCCCAAAGCAATCATGGAATCGATTCCTTCACAAGAATGGTCTGGAGATAGCGTTTTCTCACTTCTGGATCACAGATTCCTGCCCTCACACAGTCAAAGCCATAGCAGATAAAGCTCCTTTTGAAGTTCTGAGTCTAGCAGCTTCCATTGCTGATGCTTTGTTGGGTTTAGGGCATTCATCCAGTAGGAATGCTAAAAGTTTCCATACTCGATCTGATTTTGGTTACTTTATGGTAGCCGGTGGTGTTGGTTGTTCTGGGTCGGTGATTGAGTTTCTGGTTCAGGTTTTGGGATTGCAGGTAGGGAAGTGTATGAGGGATTTGATTCGGGTAATTTTATTATGTTCCGTGGAGGATTCGGGAAGGAGCATAAGGAGGGATTGTGGGTTTGTGATCCGGAGCAGGGATTTTGTGTTCACTGTTCTCGACGAAGTTGGGTTTCAGAGTTTAGGGAAATGCAGACCAATCACCGATTCTGCAGAGTTGGACTTTTTCTCTGAATATGGCGATGCTAACAGATTCAAAATTCAGGAAGTTGTTGGGAAGGGGAGTTATGGAGTGGTTTGTTCAGCAGTCGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATAAATGATATTTTTGAACACCTATCGGATGCTGCTCGTATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGTCATCCTGATATTGTTGAAATCAAACACATTATGCTACCGCCTTCTCGTAGGGGGTTCAAAGATATCTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCTAATGATGATTTAACAACAAAGCACTATCAATTTTTCCTTTATCAGCTACTCCGTGCACTAAAATATATTCACGCAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATATGTGATTTTGGATTGGCTAGAGTTGCTTTCAGTGACACCCCGACAACAATATTTTGGACGGACTATGTTGCTACCAGATGGTATAGAGCTCCAGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTAACTGGAAAACCAATTTTTCCCGGTAAAAATGTTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACGCCTTCATTAGATACCATTTCTCGGGTAAGAAATGAGAAGGCTAGAAGGTACTTAGCTAGTATGAGGAAGAAGCAGCCCATTCTGTTTTCACAGAAGTTCCCAAATGCGGATCCTCTAGCCCTGCAATTACTGCAACGATTGCTTGCGTTTGATCCAAAGGATCGACCTACTGCAGAAGAGGCACTGGCAGATCCTTACTTTAAAGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAGAGGAGAAAGGTCACAAAGGACGACATTCGCGAGCTGATATTCCGGGAGATACTAGAATACCATCCTCAACTGCTGAAGGACTACTTAAATGGAACTGAGAGATCAAATTTTCTTTATCCAAGTGCACTCGATCAGTTCAAAAAACAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGCTTATCCTCTAGAAAGAAAGCATGCATCTCTTCCTAGGTCTTCGGTTCAGTCGAATACCATTCCTCCTAAAGCAACATCGAATATTGCTTCTTTTAAAGACCGATATGTGCCACCAGGGGCGTACAGCAACCGGCATTACAGAGATCCAGCTGCACAGAGGATTGCTGCAACTCAAGGTGAGCCTGGAAGAATATCAGGCCCGGTCATGCCATATGATAGTGGAAGTATCGCCAAGGATGCCTATGATCCAAGAAGGTTAATTAGAAGTGCCCTCCCTTCTCATGCTATCCATCCAACATATTATTACCAGCAATCTTGCGGCAAAAGTGAAGAATCATCAACAACAGGGGCTGAGAAAGACACTTCCTTGCACTGCAAACAAGCCCCTCAATGCGGAATGGCAGCCAAATTAACATCCGACACAGCAGCTACTGGTGCTTTCTCAAATCCTTTTTTTATGGCACGTGTAGGATTGCACAAGGCGGGAAACAATGACCGTGCTGCACGTGTGCAGGTAAACGCTCAATATGATACTGGAGCCGTTCCAGCTGCAACTGCCACCACCCATAGAAACACTGGCATGGTTGAGTATGGTATGACAAGAATGTATTAG | 3015 | 43.55 | MANPAKKHVFLFYCAECEELAHKVAAQSDSITLQTIKWRTFDDGFPNIYINNAQDLRGNHVAFLASFSHPGAIFEQISVIYNLPRLFSASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPISRGGPTSVVIYDIHALQERFYFGDNVLPLFETGIPLLKQRLRQLPDADNVVIAFPDDGAWKRFHKQLDGYPVVICTKVREEDKRIVRIKEGVPAGCHVVIVDDLKVLAAHGAAKVSAYVTHGVFPKQSWNRFLHKNGLEIAFSHFWITDSCPHTVKAIADKAPFEVLSLAASIADALLGLGHSSSRNAKSFHTRSDFGYFMVAGGVGCSGSVIEFLVQVLGLQVGKCMRDLIRVILLCSVEDSGRSIRRDCGFVIRSRDFVFTVLDEVGFQSLGKCRPITDSAELDFFSEYGDANRFKIQEVVGKGSYGVVCSAVDTLTNEKVAIKKINDIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTTKHYQFFLYQLLRALKYIHAANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPIFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLASMRKKQPILFSQKFPNADPLALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFREILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPAYPLERKHASLPRSSVQSNTIPPKATSNIASFKDRYVPPGAYSNRHYRDPAAQRIAATQGEPGRISGPVMPYDSGSIAKDAYDPRRLIRSALPSHAIHPTYYYQQSCGKSEESSTTGAEKDTSLHCKQAPQCGMAAKLTSDTAATGAFSNPFFMARVGLHKAGNNDRAARVQVNAQYDTGAVPAATATTHRNTGMVEYGMTRMY | 1004 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7825050 | 7833528 | - | Cp4.1LG04g02390.1 | Cpe04g00845 | 468407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00845 | 1004 | SUPERFAMILY | PRTase-like | 176 | 308 | IPR029057 | - | |
Cpe04g00845 | 1004 | MobiDBLite | consensus disorder prediction | 811 | 827 | - | - | |
Cpe04g00845 | 1004 | ProSitePatterns | Protein kinases ATP-binding region signature. | 430 | 454 | IPR017441 | GO:0005524 | |
Cpe04g00845 | 1004 | SMART | Pribosyltran_N_2 | 9 | 126 | - | - | |
Cpe04g00845 | 1004 | Gene3D | - | 166 | 288 | IPR029057 | - | |
Cpe04g00845 | 1004 | CDD | PRTases_typeI | 161 | 252 | IPR000836 | - | |
Cpe04g00845 | 1004 | ProSitePatterns | MAP kinase signature. | 459 | 562 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cpe04g00845 | 1004 | ProSiteProfiles | Protein kinase domain profile. | 424 | 715 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe04g00845 | 1004 | Gene3D | Transferase(Phosphotransferase) domain 1 | 510 | 738 | - | - | |
Cpe04g00845 | 1004 | MobiDBLite | consensus disorder prediction | 795 | 830 | - | - | |
Cpe04g00845 | 1004 | SMART | serkin_6 | 424 | 715 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe04g00845 | 1004 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 408 | 859 | - | - | |
Cpe04g00845 | 1004 | Pfam | Protein kinase domain | 425 | 715 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe04g00845 | 1004 | CDD | STKc_TDY_MAPK | 423 | 760 | - | - | |
Cpe04g00845 | 1004 | Gene3D | Phosphorylase Kinase; domain 1 | 439 | 761 | - | - | |
Cpe04g00845 | 1004 | Gene3D | - | 7 | 165 | IPR029057 | - | |
Cpe04g00845 | 1004 | SUPERFAMILY | PRTase-like | 7 | 169 | IPR029057 | - | |
Cpe04g00845 | 1004 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE 8 | 408 | 859 | - | - | |
Cpe04g00845 | 1004 | SUPERFAMILY | Protein kinase-like (PK-like) | 421 | 719 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00590 | Cpe-Chr1:3410930 | Cpe04g00845 | Cpe-Chr4:7825050 | 0 | dispersed | |
Cpe01g01559 | Cpe-Chr1:9287541 | Cpe04g00845 | Cpe-Chr4:7825050 | 7.00E-151 | dispersed | |
Cpe01g01561 | Cpe-Chr1:9300513 | Cpe04g00845 | Cpe-Chr4:7825050 | 1.18E-20 | dispersed | |
Cpe04g00845 | Cpe-Chr4:7825050 | Cpe12g00231 | Cpe-Chr12:1545585 | 0 | dispersed | |
Cpe15g00875 | Cpe-Chr15:8476173 | Cpe04g00845 | Cpe-Chr4:7825050 | 1.17E-160 | transposed | |
Cpe15g00873 | Cpe-Chr15:8465383 | Cpe04g00845 | Cpe-Chr4:7825050 | 0 | wgd | |
Cpe16g00730 | Cpe-Chr16:7402300 | Cpe04g00845 | Cpe-Chr4:7825050 | 0 | wgd | |
Cpe04g00845 | Cpe-Chr4:7825050 | Cpe05g01548 | Cpe-Chr5:10632667 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62351 | PF00069 | Pkinase | 6.30E-66 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00845 | - | - | csv:101214068 | 1075.46 |