Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00860 ATGGCCGCCCAAGTGAGTAGTCTTATTCGAGTTCTCGCCGGCTACGAGGACCAAGATAACCGGACCGCCCTCGAGGAATCAACGCCTCTCACTACTCGTGATTTGCTCGGTCAATCTTCCAACCTCGCTGACTCTCAGGAACTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAGCGCCTCGACTTGAAGTCGGGAAAAGTTTACATACAGAGAAGTCAAACTCCAGATTCTCCTCTGAATTCAGATTCCAAACAACGCCAAATGAAGAATCAAACAGAATCCAAATCCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACCTTAAATCTCTTCAATGAAACCAGCTTGGGTTTGAATTTGACGTCGTCGACCAATTACGCCAGCGTTTGCACTCTGGATAAGGTCAAATCTGCTTTAGAAAGGGCCGACAAGGAGCTGATTAAAAAACGGTCTACGGTTTGGAAGTCGCCGTCCTCCCCCTCGGCGGCGAAGGAAATTCAAGAAGAAGAGGCGGCGGAAAGTAGAAAGTCGGCGGCGCCGATGGCGGTGGGTTGTCCTGGATGTCTATCTTATGTATTGGTGACGAAAAACAACCCAAGATGTCCTCGATGCAATTCTGTTGTTCCATTGGCGAGCATGAAGAAACCTCGAATCGACCTAAACATATCCATATAA 687 48.76 MAAQVSSLIRVLAGYEDQDNRTALEESTPLTTRDLLGQSSNLADSQELDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNETSLGLNLTSSTNYASVCTLDKVKSALERADKELIKKRSTVWKSPSSPSAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLASMKKPRIDLNISI 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7918265 7919693 + Cp4.1LG04g02250.1 Cpe04g00860 468422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00860 228 PANTHER PUTATIVE-RELATED 1 227 - -
Cpe04g00860 228 PANTHER F3O9.30 1 227 - -
Cpe04g00860 228 MobiDBLite consensus disorder prediction 157 181 - -
Cpe04g00860 228 MobiDBLite consensus disorder prediction 72 110 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00860 Cpe15g00895 CCT
Cpe04g00860 Cpe16g00715 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00291 Cpe-Chr3:1512990 Cpe04g00860 Cpe-Chr4:7918265 3.71E-07 dispersed
Cpe04g00860 Cpe-Chr4:7918265 Cpe16g00715 Cpe-Chr16:7288796 5.90E-75 dispersed
Cpe15g00895 Cpe-Chr15:8613048 Cpe04g00860 Cpe-Chr4:7918265 6.38E-135 wgd
Cpe16g00714 Cpe-Chr16:7287369 Cpe04g00860 Cpe-Chr4:7918265 5.11E-17 wgd
Cpe04g00860 Cpe-Chr4:7918265 Cpe05g01568 Cpe-Chr5:10784277 4.99E-32 wgd
Cpe04g00860 Cpe-Chr4:7918265 Cpe05g00444 Cpe-Chr5:2555104 1.39E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00860 - - csv:101214550 375.17