Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00866 ATGCATAAATTAAGCAGAGGACACCGAGACAAACTCCAACAGTTTATGGCCATAACTGGTACAAGTGAAAAGGTTGCTCACCAGGCCCTGAAGGCTAGTGAGTGGCATCTTGAAGGAGCTATTGATGTGTTTTACAGTCAACCCCTAATTAAAGCATTCACCGACTCTAGACATTTGGAAGAGCTTTATAGCAGATATAAAGGCAAGATTTATATTCGTTTATCATTACTAGATTTCTTTTCTTTCTATCCATATGTTGACATGATATTGGCTGATGGTATCTCACTGCTCTGCAATGACCTTCAGGTGGATCCTCAAGATATAGTTATGTTGGTTGTTTCTTGGCATATGAAGGCGAACACAATGTGTGAATTTTCCAAACAGGAATTTATAGGTGGATTACAAGCACTAGGGATAGATTCTCTGGAGAGGTTCAGAGAAAGGATACCATATATGCGCTCTGAGTTGAAAGACGAACATAAGTTTCGTGATATTTACAACTTCGCATTTGGTTGGGCAAAAGAAAAGGGGCAGAAATCCTTAGCATTGGACACTGCAATTGGAATGTGGCAGTTACTATTTGCTGAAAAGCAGTGGCCTCTGGTTGACCACTGGTGTCAGTTCTTGCAGGCTCGGCATAATAAAGCTATTTCTAGGGACACGTGGTCTCAGCTTCTGGAGTTTGCAAGGACTGTGGATCCTACACTATCAAATTACGATGCCGAAGGTGCATGGCCATACCTCATCGATGAATTTGTTGAATACCTGAACGAGAATGGCATAATCCATGGTGGTCAACCGAATGATTCGAGTCAAGTAAGATGA 825 41.58 MHKLSRGHRDKLQQFMAITGTSEKVAHQALKASEWHLEGAIDVFYSQPLIKAFTDSRHLEELYSRYKGKIYIRLSLLDFFSFYPYVDMILADGISLLCNDLQVDPQDIVMLVVSWHMKANTMCEFSKQEFIGGLQALGIDSLERFRERIPYMRSELKDEHKFRDIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFARTVDPTLSNYDAEGAWPYLIDEFVEYLNENGIIHGGQPNDSSQVR 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7949711 7954254 - Cp4.1LG04g02200.1 Cpe04g00866 468428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00866 274 Pfam UBA-like domain 9 47 - -
Cpe04g00866 274 ProSiteProfiles DCUN1 domain profile. 54 257 IPR005176 -
Cpe04g00866 274 Gene3D - 5 47 - -
Cpe04g00866 274 Gene3D - 55 157 - -
Cpe04g00866 274 Gene3D Cullin, PONY binding domain 158 263 IPR042460 -
Cpe04g00866 274 PANTHER RP42 RELATED 14 263 IPR014764 -
Cpe04g00866 274 SUPERFAMILY UBA-like 5 46 IPR009060 GO:0005515
Cpe04g00866 274 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 14 263 - -
Cpe04g00866 274 CDD UBA_DCNL 8 48 - -
Cpe04g00866 274 Pfam Cullin binding 146 255 IPR005176 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00866 Cpe15g00904 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02395 Cpe-Chr1:19997270 Cpe04g00866 Cpe-Chr4:7949711 1.32E-20 transposed
Cpe15g00904 Cpe-Chr15:8683531 Cpe04g00866 Cpe-Chr4:7949711 7.95E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00866 K17822 - csv:101216476 488.804