Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00867 ATGTTAAACCTTTTCTCTGTTTTCCTTTTCCTCACCTTCATCCTCCCTGCTCATGTAGTCCACGCCGGGCGTGGGCGGGAGTCTTGTACCTGTCATTCCGCCGCCGACCACAACGCAGAGGAGGCAATCAAATACAAGGTTGGCTCGATTGCTTCGGTGCTCGTGGCCGGCGCTGCGGGTGTGAGCCTTCCTTTGGTGGGCAAGAAGATTCCGTCTCTGAGGCCTGAAAATGACATCTTTTTCATGATCAAGGCTTTTGCTGCGGGTGTCATTTTAGGCACTGGGTTCATCCACATACTGCCTGATGCCTTCCAGGACTTGACCTCCCCCTGCATCGGACAGAACCCTTGGGGCGATTTCCCATTTGCGGGGTTCATTGCCATGGCCTCCTCCATCGGCACCTTGATGGTGGACACATTCGCAACCAGCTTCTACCAGAGACGCCACTTCAGTAAAATCAAGCATGTAATTGCAGTTGCAGACCAGGAAAGAGGCGAGGAGCATGCCGGTCACGTGCATGTCCACACCCACGCCACACATGGTCACGCTCACGGCTCTGCAGCACCCACCGGAGAAACATCGAGTCTGACTGAGTTAATCCGGTACCGGATTGTATCTCAGGTGTTGGAATTGGGGATTGTGGTTCATTCAGTAATAATTGGGATTTCTCTTGGTACCTCCCACAGCCCTGCCACCATTAAGCCACTGCTGGTGGCTCTGTCTTTCCACCAGTTTTTTGAGGGAATGGGACTCGGTGGCTGCATTTCCCAGGCACAGTTTAGGTGGCGATCAGCGGCAGCAATGGCGACATTTTTTTCACTGACAGCGCCTGTGGGCATTGCAGTGGGAATCGGAATTTCGGGAGTTTACAGAGACAGCAGCCGGACGACTCTGATCGTGGAAGGGAGCATGAACTCTGCATCGGCTGGGATATTGATATACATGGCGCTGGTGGATCTTCTTGCGGCGGATTTCATGAACCCAAGGATGCAGAATAATTTGGGGCTTCAATTAGGATCTAATATCTCTTTGCTTCTGGGGGCTGCTTGCATGTCTGTATTGGCCAAATGGGCTTGA 1077 52.65 MLNLFSVFLFLTFILPAHVVHAGRGRESCTCHSAADHNAEEAIKYKVGSIASVLVAGAAGVSLPLVGKKIPSLRPENDIFFMIKAFAAGVILGTGFIHILPDAFQDLTSPCIGQNPWGDFPFAGFIAMASSIGTLMVDTFATSFYQRRHFSKIKHVIAVADQERGEEHAGHVHVHTHATHGHAHGSAAPTGETSSLTELIRYRIVSQVLELGIVVHSVIIGISLGTSHSPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWRSAAAMATFFSLTAPVGIAVGIGISGVYRDSSRTTLIVEGSMNSASAGILIYMALVDLLAADFMNPRMQNNLGLQLGSNISLLLGAACMSVLAKWA 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7958308 7959764 + Cp4.1LG04g02260.1 Cpe04g00867 468429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00867 358 PANTHER METAL TRANSPORT PROTEIN 26 358 - -
Cpe04g00867 358 Pfam ZIP Zinc transporter 45 355 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe04g00867 358 TIGRFAM zip: ZIP zinc/iron transport family 30 358 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cpe04g00867 358 PANTHER ZINC/IRON TRANSPORTER 26 358 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00867 Cpe-Chr4:7958308 Cpe06g00552 Cpe-Chr6:3318109 3.72E-124 dispersed
Cpe06g00550 Cpe-Chr6:3309078 Cpe04g00867 Cpe-Chr4:7958308 3.80E-64 dispersed
Cpe15g00906 Cpe-Chr15:8697039 Cpe04g00867 Cpe-Chr4:7958308 9.45E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00867 K14709 - csv:101216720 505.753