Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00939 ATGAGGCCTGTCAAGCGCGAACCCGCCGCTAGCAGCCGCAGTAATCAGAGTAAAGGCGGCGACGCCGTCGATGCTGTGAATTTAAGAGATGTTAAGCGGGCGAGGGTTTCTCGGGAGAAAGAGAACATCGGCGAGGGCAACATGGCTGAAGCTGAAGAGGGTCAGCAAGGCTTGACGAAGCGGCGGGTTCTCCGGTCTCGGTATCTTGCGGTCATTCACGAGATTAGTGTTCAGAAGCCGAGGGAACAAGTTGCAGATGCAGAAGCCTTGCAAGATATTGCAAACTCCCTGGTGACCTCTATTAAGTCGCAGTCAAATGAAGGTGTTACTCCGTCGGATTTTGTGAGCTGTCTGCTCAAAGAATTTGCTAACATTGAAGGCGGTATAACATCCGAAGAAAACGATCCGATTTCTGTCAGTTGGAAAGATATTGGATTAGGCGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACCATGCTTGGACCTATGAGCACTCAGTTGAAGCAGCGAAAGACTAATATTGCCCGGAAACGTTCAAGGCCTACTGAAAGTTCGAGACCTGCAGAGGTTGATGAAGATGGATCTGAAGAAAAAACAGATACAGATAAGAACATGAGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGCTAGACTTGAACATTTGATATTGAATAGAAACTCTTTTGCACAGACAATAGAGAACTTATTTGCTCTCTCCTTTCTGGTCAAGGATGGTCGGGCCGAGATAACTATTGATAAAAATGGTTCTCATTTTGTATCTCCGAAGAATGCCCCGGCCCATAGTGCCATTATGTCACACGAAGTTAATTATAGTCACTTCGTATTCAGATTCGATTTTAAGGATTGGAAGTTGATGATGGATATAGTACCAGTTGGAGAGGAGTTGATGCCCCACAGGAACTTTCTAAATTCAGCACCCATACCCCAAGAAGAAGCAGCCACGGACGATTCTGAATCAGCGACATTGCCTACCACGCCAATTCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATGCAAACTGTTGTTGAGGATTCCCCTGATAATGATGGCGCTCATTCAGGACCAACTGCAATGTTGAGGTGCAAGAAAAAGCTTAGTCAAGGTTAG 1140 45.61 MRPVKREPAASSRSNQSKGGDAVDAVNLRDVKRARVSREKENIGEGNMAEAEEGQQGLTKRRVLRSRYLAVIHEISVQKPREQVADAEALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFANIEGGITSEENDPISVSWKDIGLGVSSIFMNGHGCRTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEEKTDTDKNMSIMFGILRRNKTARLEHLILNRNSFAQTIENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKLMMDIVPVGEELMPHRNFLNSAPIPQEEAATDDSESATLPTTPIRKLSRNRGLVMQTVVEDSPDNDGAHSGPTAMLRCKKKLSQG 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8487503 8491809 + Cp4.1LG04g11970.1 Cpe04g00939 468501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00939 379 MobiDBLite consensus disorder prediction 320 340 - -
Cpe04g00939 379 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 76 376 - -
Cpe04g00939 379 MobiDBLite consensus disorder prediction 1 25 - -
Cpe04g00939 379 Pfam Nse4 C-terminal 221 307 IPR014854 -
Cpe04g00939 379 PANTHER UNCHARACTERIZED 76 376 IPR027786 GO:0005634|GO:0006281|GO:0030915
Cpe04g00939 379 MobiDBLite consensus disorder prediction 353 379 - -
Cpe04g00939 379 MobiDBLite consensus disorder prediction 37 57 - -
Cpe04g00939 379 MobiDBLite consensus disorder prediction 163 202 - -
Cpe04g00939 379 MobiDBLite consensus disorder prediction 325 339 - -
Cpe04g00939 379 MobiDBLite consensus disorder prediction 178 202 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00939 Cpe18g00141 CCT
Cpe04g00939 Cpe18g00141 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00141 Cpe-Chr18:2976005 Cpe04g00939 Cpe-Chr4:8487503 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00939 K22825 - csv:101220149 589.726