Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00955 ATTCGTCATTCGAGTTCGATTGATTCCTTTTTTTTTGGGGGGGAAATGATGATGATGTTCAATGAGATGGGATTTTGTGATGATATTGATTTCCTTTCGGCTCCGATTGTGGAAGGAGATGTGGTAGCTCCACAGGCCGATCCTGAAGTCGTGGTGGAAGATGATTATTCTGATGAAGAGATCGACGTCGATGAGCTCGAGAGGAGGATGTGGAAGGATAAGATGCGTCTTAAGCGTCTTAAAGAGCAGAGTAAGGTTAAGGAAGGAGTCGATATTGCGAAGCAGCGACAGTCTCAAGATCAGGCTAGGAGGAAGAAGATGTCGAGGGCGCACGATGGGATCTTGAAGTATATGTTGAAGATTATGGAGGTTTGTAACGCTCAAGGTTTTGTATATGGAATAATTCCCGAGAAGGGAAAACCGGTAACTGGGGCGTCTGATAATCTTAGAGAATGGTGGAAAGATAAGGTCCGATTTGATAGAAACGGACCAGCTGCCATAGCTAAGTACCAAGCGGATAATGCGATCCCGGGACGAAACGACGGCGAGTATGATGTAGAAGGCGCCGAGGAAGAACCGAACTTCGATGTTCAAGAACGCAAACCCGATAACCATAGCTCATTCAGCTTAGGAATGGAGAGAATGAGAGAACACGTACCCCTTCGACAACCTCCTTATGCAATCAAAGGAGAAGTCGTCGCCACCGCCGCCGCAAACTTGGATTTTATGCGAAAGAGGAAGCCAACGTGCGATCTGAACATGATGATGGATCAGAAGATCTATACTTGTGAGTTCCTCCAGTGTCCTTATAGCGAACTCCGTCTCGGGTTCAACGACAGAACGTCGAGAGACAATCATCAGTTGACCTGCCCATACAGAACTTCTTCCGAGTTCAGCGGTTCAAATTTTCACGTTAACGAGGTTAAACCAGTTATCTTCCCGCAATCGTTCGCCCCACCCAAACCAGCTCCACCTCCCGTCAGCTCGGTCCCATCTTCCTTCGACTTGTCGAGTTTGGGAGTTCCAGAAGACGGTCAAAAGCACATCAGTGAGCTCATGTCGATCTACAACACGAACATCCAAGGCAACAAGAACAACGTAATCACCATCACAGAGAACCAAAATCAAGGTATAATGATCGACGCTAATTTCTTCGAAGGATCGAGTCTTTCGAGCAGCCATCAAATGTTCACAAGACCGATGAATTCCTCGTTCGAAAACAACCACCAGAACAACAACAACAACAACTTTCACTTGATGTTCGGCTCTCCGTTCGATTTGTCGACGTTCGACTACAAAGAAGAAGTACACGGAGGAGCAGCAGCCATCGACACACTGCCGAAACACCAGGATATTCCGTTATGGTATCAGTAA 1374 46.72 IRHSSSIDSFFFGGEMMMMFNEMGFCDDIDFLSAPIVEGDVVAPQADPEVVVEDDYSDEEIDVDELERRMWKDKMRLKRLKEQSKVKEGVDIAKQRQSQDQARRKKMSRAHDGILKYMLKIMEVCNAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGEYDVEGAEEEPNFDVQERKPDNHSSFSLGMERMREHVPLRQPPYAIKGEVVATAAANLDFMRKRKPTCDLNMMMDQKIYTCEFLQCPYSELRLGFNDRTSRDNHQLTCPYRTSSEFSGSNFHVNEVKPVIFPQSFAPPKPAPPPVSSVPSSFDLSSLGVPEDGQKHISELMSIYNTNIQGNKNNVITITENQNQGIMIDANFFEGSSLSSSHQMFTRPMNSSFENNHQNNNNNNFHLMFGSPFDLSTFDYKEEVHGGAAAIDTLPKHQDIPLWYQ 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8670547 8672394 + Cp4.1LG04g11790.1 Cpe04g00955 468517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00955 457 Coils Coil 63 83 - -
Cpe04g00955 457 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 17 182 IPR006957 GO:0005634
Cpe04g00955 457 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 182 456 IPR006957 GO:0005634
Cpe04g00955 457 Gene3D - 96 174 IPR023278 GO:0003700|GO:0005634
Cpe04g00955 457 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 17 182 - -
Cpe04g00955 457 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 182 456 - -
Cpe04g00955 457 MobiDBLite consensus disorder prediction 88 107 - -
Cpe04g00955 457 Pfam Ethylene insensitive 3 64 183 IPR006957 GO:0005634
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00955 Cpe18g00129 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00738 Cpe-Chr1:4294084 Cpe04g00955 Cpe-Chr4:8670547 3.92E-37 dispersed
Cpe04g00955 Cpe-Chr4:8670547 Cpe13g00722 Cpe-Chr13:6655616 1.95E-52 dispersed
Cpe04g00932 Cpe-Chr4:8443381 Cpe04g00955 Cpe-Chr4:8670547 2.95E-51 transposed
Cpe18g00129 Cpe-Chr18:2858931 Cpe04g00955 Cpe-Chr4:8670547 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49392 PF04873 EIN3 3.30E-55 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00955 K14514 - csv:101206055 405.986