Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00998 ATGGGGAGAGAATTGCAGAAGCAGCCACAACAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTCGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGCTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACACAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCGCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGGAAGGGCCAACTTATCGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATTACTCGCATCTTTCCAATTCTCGGCTAA 699 44.64 MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8969779 8972957 - Cp4.1LG04g11270.1 Cpe04g00998 468560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00998 232 Gene3D - 128 230 IPR036388 -
Cpe04g00998 232 SUPERFAMILY Winged helix DNA-binding domain 137 229 IPR036390 -
Cpe04g00998 232 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 8 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
Cpe04g00998 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 8 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
Cpe04g00998 232 Pfam CSN8/PSMD8/EIF3K family 67 194 IPR033464 -
Cpe04g00998 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 8 232 - -
Cpe04g00998 232 Gene3D ARM repeat; domain 1 8 125 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Cpe04g00998 232 ProSiteProfiles PCI domain profile. 47 206 IPR000717 -
Cpe04g00998 232 SUPERFAMILY ARM repeat 10 135 IPR016024 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00998 Cpe18g00285 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00285 Cpe-Chr18:4422529 Cpe04g00998 Cpe-Chr4:8969779 1.30E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00998 K15028 - csv:101214255 450.669