Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01009 ATGGCCCTCTCTATTTCTTCCGCTGCGCTCTCAACAATCCCAATCAGAGAATCATCCCACACCCACCACAGAGCACTTAATTTCCCCGGAAAATTCCCAAAATACAATCTCCGGCGAGGTTCTACTCATCTGAAAGCTGCAAAATCCGGCGTATCTAGCGTCTGTGAACCGCTCCCTCCAGATCGACCCCTCTGGTTCCCCGGCAGCACCCCCCCTGAGTGGCTCGACGGCAGTCTTCCCGGCGATTTCGGCTTCGACCCACTTGGATTGGGATCCGACCCAGAGCTCCTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTCGCAGTGGCCGGAATCCTCCTCCCCGAATGGTTCGAAAGCTTAGGACTGATTCAAAATTTCTCCTGGTACGACGCCGGAACGCGAGAATACTTTGCAGACCCGATGACATTGCTGGTGGCTCAATTGGGTCTAATGGGGTGGGTTGAGGGGCGGCGGTGGGCGGACATGGTTAACCCAGGAAGCGTCGACGTGGACCTCAAACTACCTCACAAGAAAAGGCCAACACCGGACGTGGGCTACCCCGGCGGGTTCTGGTTCGACCCGATGATGTGGGGCAGGGGATCGCCGGAGCCGGTCATGGTGCTGCGGACTAAGGAGATCAAGAACGGGCGGCTGGCGATGCTGGCGTTTGTCGGACTGTGGTTTCAGGCTATTTATACAGGGCAAGGTCCGCTGGAGAATCTCGCCGCCCACGTTGCCGATCCCGGCCACTGCAACATCTTCTCGGCATTCAGCTCCGGTGGAATTTGA 810 57.28 MALSISSAALSTIPIRESSHTHHRALNFPGKFPKYNLRRGSTHLKAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPMTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHKKRPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGGI 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9034391 9036485 + Cp4.1LG04g11230.1 Cpe04g01009 468571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01009 269 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 264 - -
Cpe04g01009 269 Gene3D Chlorophyll a/b binding protein domain 72 257 - -
Cpe04g01009 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Cpe04g01009 269 Pfam Chlorophyll A-B binding protein 71 237 IPR022796 -
Cpe04g01009 269 SUPERFAMILY Chlorophyll a-b binding protein 61 264 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01617 Cpe-Chr1:9892903 Cpe04g01009 Cpe-Chr4:9034391 6.10E-71 dispersed
Cpe04g01009 Cpe-Chr4:9034391 Cpe18g00788 Cpe-Chr18:7444269 6.18E-65 dispersed
Cpe13g00676 Cpe-Chr13:6360083 Cpe04g01009 Cpe-Chr4:9034391 1.22E-39 dispersed
Cpe19g00292 Cpe-Chr19:2526940 Cpe04g01009 Cpe-Chr4:9034391 4.18E-36 dispersed
Cpe04g01009 Cpe-Chr4:9034391 Cpe09g00591 Cpe-Chr9:4104797 2.77E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01009 K08908 - csv:101211430 490.73