Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01037 ATGAGTGGACCAGTTAACATCATTGTTGGTTCTCATGTCTGGATTGAAGATCCAAAACTAGCATGGATTGATGGTGAAGTTTTTCGTATCAATGGAGAGGAAATTCACGTCCGCACTACAAATGGGAAGACGGTTGTTGCAAATATATCAAAAATATTCCCCAAGGATACCGAAGCACCTGCTGCAGGTGTCGATGACATGACAAAGTTGTCATACTTGCATGAACCTGGAGTTCTGAGCAACTTGGCTACCAGATATGAACTCAATGAAATCTATACATACACTGGAAATATACTTATTGCCATAAATCCATTCCAAAGATTACCCCATCTGGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACTGAGACCACGAAGATGCTCATGCGGTACCTTGCATACCTTGGAGGCCGATCTGGAGTGGAAGGACGAACAGTTGAACAACAAGTCCTGGAATCCAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTTAGGAACAATAATTCAAGCTCCATCAAATTTGAAATTGATGAAAGGGAGAAGTATAAATTAGGAGACCCTAAATCGTTCCACTACTTAAATCAATCTAAATGCTTTGAGTTGGATGGAATCAACGATGCCCATGAATATCTTGCGACCAGAAGGGCGATGGATGTAGTTGGAATCAGCGAGGAGGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCAATTTTGCATCTTGGAAATGTTGAATTTGCAAAGGGAGAAGAGATTGATTCTTCAGTCATTAAGGACGAAAAATCCAGATTCCATCTCAATATCACTGCCGAATTGCTTAAGTGTGATGCAAAGAGTTTGGAAGATGCACTGATTCAACGTGTTATGGTAACGCCAGAAGAAGTTATAACTCGAACTCTTGATCCTGTTGCTGCATTGGGTAGTAGGGATGCCTTGGCTAAAACGATCTATTCACGGCTCTTCGACTGGCTCGTGGAGAAGATTAACAACTCAATTGGACAAGACCCAAATTCTAAATCATTGATTGGAGTTCTGGATATATATGGATTTGAGAGTTTTAAATTCAACAGCTTCGAACAGTTCTGCATCAATTTTACAAATGAAAAACTGCAGCAACATTTCAATCAGCACGTTTTCAAAATGGAGCAGGAGGAATATACCAAAGAGGAGATCAATTGGAGTTATATTGAGTTTGTTGATAACCAGGATGTCTTGGATCTTATTGAAAAGAAACCTGGAGGAATTATTGCTCTTCTGGATGAGGCCTGCATGTTTCCTAAATCTACACACGAAACGTTTGCTCAGAAGTTATACCAGACGTTCAAGAACAACAAGCGCTTCATTAAGCCTAAGCTATCTCGTACTAGCTTCACAATATCTCATTATGCTGGAGAGGTGACTTATTTGGCAGATCTTTTCTTGGACAAAAACAAAGACTATGTGGTAGCAGAGCATCAGGCCTTATTGACAGCCTCAAAATGCCCCTTTGCTAGAGCTCTATTTCCTCCTCAACCAGAGGAATCATCAAAATCCTCAAAATTTTCTTCCATCGGTTCACGTTTTAAGTTGCAACTTCAATCTTTAATGGAGACCTTGAATTCGACAGAACCTCACTATATCAGATGTGTCAAGCCAAATAATGTGCTCAAGCCTGCTATTTTTGAGAACTCAAATGTTATCCAGCAATTACGTTGTGGTGGTGTTCTTGAAGCAATAAGGATCAGCTGTGCTGGATATCCTACGAGAAGAACATTTTATGAGTTCCTCCTACGTTTCGGGGTTCTTGCACCTGAAGTTCTGGATGGGAACTATGACGATAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGATTGAAAGGTTATCAGATTGGTAAGACAAAAATCTTCCTGAGGGCTGGCCAGATGGCTTCTCTGGATGCAAAGAGAACAGAGATGCTTAGCAACGCTGCCCGAACTATTCAAATGCAAATTCGAACATTTATTGCACGCAAGGAGTTCGTTGCATTACGTAAAGCTGCTATCCAAGTGCAATCATTTACTCGAGGTGTATTGGCTCGAAAACTCTTCGAGCAGTTGAGACAGGAAGCAGCAGCTTTAAGAATCCAGAAGTGTTTCAAGCGACATGTTGCCAGGAAATCGTACTTAGATTTGCTCTCATCTGCAACCACATTGCAAACGGGGTTAAGGGCGATGAAGGCTCGTGATGAGTTCAGATTTAGGAAGCGTACGAAGGCAGCAATTATCATTCAGGCACGTTGGCGTTGTCACATGGCATATTCTTACTATACGAGACTCCAAAAGGCTGCATTATACACACAATGTGGTTGGAGGCGACGAGTTGCACGAAAGGAGCTAAGACAACTGAAAATGGCTGCAAGGGAAACTGGTGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTAGAAGAACTTACATGGCGCTTGCAACTCGAGAAGCGGCTGAGGGCTTTGCTGCTGTCAGAGAAAAAGACGTCCGAAGAGGCTAAAAAAGCTTATACAGATGCAGAAGCTAAAAATGTGGAGCTGGCTAAAAAACTTCAAGATGCAGACCAAAAGGTCGATCAACTTCAGGAGTCGGTGCAGAGGCTTGAAGAGAAGCTTTCAAATTCAGAATCGGAGAACCAGGTACTTCGTCAGCAAGCCTTGACCATGTCGCCAACAGGAAAAGCTTTATCTGCGAGACCGAAGTCGGTGATCATTCAGAGGACACCAGAGAATGGAAACATTCCACATGGAGAAGCCAAAGTATCATCTGATACAACTCTAGCATTATCGACGATACGTGAACCTGAATCAGAGGAAAAACCACAGAAATCGCTTAATGAAAAGCAGCAGGAGAACCAAGACCTGCTAGTGAAGTGCATAACACAGGATTTGGGATTTTCTGGAGGCAAACCAGTTGCTGCTTGTGTTATATACAAATGTCTTCTTCATTGGAGGTCGTTCGAAGTCGAAAGAACCAGCATATTCGATCGAATCATTCAAACAATAGCTTCATCCATAGAGGTCCAGGATAACAATGACGTATTAACTTATTGGTTATCGAATACGTCGACGTTATTGTTGCTTCTTCAACACACTCTCAAAGCAAGTGGAGCTGCAAGCTTGACCCCTCAAAGAAGGAGAACTGCTTCTTCTTCTCTTTTTGGAAGGATGTCTCAAGGATTAAGGGCTTCTCCACAAAGTGCTGGACTATCATTTCTAAGTAGCCGGGGGCTCGGTAGGTTGGACGATTTTCGGCAGGTCGAGGCCAAGTATCCAGCACTGTTGTTTAAGCAACAGCTTACAGCATTCTTGGAGAAAATATATGGAATGATAAGAGACAACCTAAAGAAAGAGATCTCGCCTTTACTTGGATTATGTATTCAGGCTCCTAGGACGTCACGAGCAAGCTTAGTGAAAGGACGCTCCCAAGCTAACGCTATTGCTCAGCAGGCCTTAATTGCTCATTGGCAAAGCATTGTAAAAAGTTTAAACAATTATTTGAAGATCATGAAAGCAAACTATGTTCCTCCATTCTTAGTCCGCAAAGTCTTCACTCAGATATTCTCGTTTATTAACGTTCAACTATTCAACAGCCTTCTTTTGCGGCGCGAGTGTTGTTCGTTCAGCAATGGAGAGTATGTGAAAGCTGGCTTGTCTGAATTAGAACAATGGTGTTCTGGGGCAACTGAGGAATATGCAGGCTCGGCTTGGGACGAATTGAAGCATATTAGACAGGCTGTTGGATTCCTTGTCATACATCAAAAACCGAAAAAGACGTTGAACGAGATAACAAAAGACCTATGTCCTGTGCTTAGCATACAACAGTTATATAGGATCAGTACTATGTACTGGGATGACAAATACGGCACGCATAGTGTATCCTCGGAAGTTATATCGAGTATGCGAAAACTGATGACGGAAGACTCCAACAATGCTATTAGCTCATTCCTGTTAGATGATGACTCTAGTATCCCATTTTCAGTGGACGACATCTCGAAATCAATGAAACAAGTAGACGTAACAGACATCGATCCTCCACCGCTGATACGAGAAAACTCCGGGTTCGGGTTTTTGCTTCAACGTGCAGAGTAG 4140 42.17 MSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEIHVRTTNGKTVVANISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSSIKFEIDEREKYKLGDPKSFHYLNQSKCFELDGINDAHEYLATRRAMDVVGISEEEQEAIFRVVAAILHLGNVEFAKGEEIDSSVIKDEKSRFHLNITAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCPFARALFPPQPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEMLSNAARTIQMQIRTFIARKEFVALRKAAIQVQSFTRGVLARKLFEQLRQEAAALRIQKCFKRHVARKSYLDLLSSATTLQTGLRAMKARDEFRFRKRTKAAIIIQARWRCHMAYSYYTRLQKAALYTQCGWRRRVARKELRQLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRALLLSEKKTSEEAKKAYTDAEAKNVELAKKLQDADQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSVIIQRTPENGNIPHGEAKVSSDTTLALSTIREPESEEKPQKSLNEKQQENQDLLVKCITQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRIIQTIASSIEVQDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTASSSLFGRMSQGLRASPQSAGLSFLSSRGLGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAIAQQALIAHWQSIVKSLNNYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRKLMTEDSNNAISSFLLDDDSSIPFSVDDISKSMKQVDVTDIDPPPLIRENSGFGFLLQRAE 1379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9169006 9183340 - Cp4.1LG04g10930.1 Cpe04g01037 468599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01037 1379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 807 IPR027417 -
Cpe04g01037 1379 Gene3D - 757 806 - -
Cpe04g01037 1379 Gene3D - 657 709 - -
Cpe04g01037 1379 Gene3D - 710 756 - -
Cpe04g01037 1379 Gene3D - 591 654 - -
Cpe04g01037 1379 ProSiteProfiles Dilute domain profile. 1012 1323 IPR002710 -
Cpe04g01037 1379 Pfam IQ calmodulin-binding motif 709 727 IPR000048 GO:0005515
Cpe04g01037 1379 Pfam IQ calmodulin-binding motif 683 702 IPR000048 GO:0005515
Cpe04g01037 1379 Pfam IQ calmodulin-binding motif 661 679 IPR000048 GO:0005515
Cpe04g01037 1379 Pfam IQ calmodulin-binding motif 756 775 IPR000048 GO:0005515
Cpe04g01037 1379 ProSiteProfiles IQ motif profile. 682 711 IPR000048 GO:0005515
Cpe04g01037 1379 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 ProSiteProfiles IQ motif profile. 707 736 IPR000048 GO:0005515
Cpe04g01037 1379 PANTHER MYOSIN-5 113 184 - -
Cpe04g01037 1379 PANTHER MYOSIN-5 6 111 - -
Cpe04g01037 1379 SMART MYSc_2a 56 657 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 709 IPR027417 -
Cpe04g01037 1379 Pfam Myosin N-terminal SH3-like domain 9 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 Gene3D - 190 234 - -
Cpe04g01037 1379 ProSiteProfiles IQ motif profile. 755 781 IPR000048 GO:0005515
Cpe04g01037 1379 ProSiteProfiles Myosin motor domain profile. 62 656 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 PANTHER MYOSIN-5 838 1375 - -
Cpe04g01037 1379 PANTHER MYOSIN-5 190 837 - -
Cpe04g01037 1379 Pfam Myosin head (motor domain) 112 184 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 Pfam Myosin head (motor domain) 64 109 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 Pfam Myosin head (motor domain) 190 644 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 PANTHER MYOSIN 113 184 - -
Cpe04g01037 1379 Gene3D Kinesin motor domain 347 586 IPR036961 -
Cpe04g01037 1379 PANTHER MYOSIN 838 1375 - -
Cpe04g01037 1379 PANTHER MYOSIN 190 837 - -
Cpe04g01037 1379 PANTHER MYOSIN 6 111 - -
Cpe04g01037 1379 SMART DIL_2 1198 1305 IPR002710 -
Cpe04g01037 1379 PRINTS Myosin heavy chain signature 353 381 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 PRINTS Myosin heavy chain signature 406 434 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 PRINTS Myosin heavy chain signature 25 50 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe04g01037 1379 Gene3D Kinesin motor domain 12 111 IPR036961 -
Cpe04g01037 1379 Pfam DIL domain 1199 1302 IPR002710 -
Cpe04g01037 1379 CDD MyosinXI_CBD 963 1345 IPR037975 GO:0007015
Cpe04g01037 1379 CDD MYSc_Myo11 76 644 IPR036018 -
Cpe04g01037 1379 ProSiteProfiles IQ motif profile. 730 759 IPR000048 GO:0005515
Cpe04g01037 1379 Coils Coil 801 835 - -
Cpe04g01037 1379 Gene3D Kinesin motor domain 112 189 IPR036961 -
Cpe04g01037 1379 ProSiteProfiles IQ motif profile. 778 807 IPR000048 GO:0005515
Cpe04g01037 1379 SMART iq_5 754 776 IPR000048 GO:0005515
Cpe04g01037 1379 SMART iq_5 658 680 IPR000048 GO:0005515
Cpe04g01037 1379 SMART iq_5 777 799 IPR000048 GO:0005515
Cpe04g01037 1379 SMART iq_5 729 751 IPR000048 GO:0005515
Cpe04g01037 1379 SMART iq_5 681 703 IPR000048 GO:0005515
Cpe04g01037 1379 SMART iq_5 706 728 IPR000048 GO:0005515
Cpe04g01037 1379 Gene3D - 363 547 - -
Cpe04g01037 1379 Coils Coil 846 901 - -
Cpe04g01037 1379 Gene3D Myosin VI head, motor domain, U50 subdomain 236 525 - -
Cpe04g01037 1379 ProSiteProfiles IQ motif profile. 659 688 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01037 Cpe18g00337 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01037 Cpe-Chr4:9169006 Cpe11g01007 Cpe-Chr11:8497930 0 dispersed
Cpe18g00337 Cpe-Chr18:4819598 Cpe04g01037 Cpe-Chr4:9169006 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01037 K10357 - nnu:104600631 2169.04