Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01091 ATGTCAAAGCTTCAGCCCCCTTTCGGGTTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGCTCACTCAAACGCACTGCCACACTAAAGGTATCAGACCCAAGAAATCGCCCAGAACCATTCTTCCCAAGAATTCCACCAAAACCCAATTCTCAGAACAGCAATTTATGAAATGGGTCAAATTCGTCGGCAGCCTCAAACACTCTGTTTTCAGAACGGCGAAGAATAAGCTTTTTCCTTCTTACACACTCCACGTCGCTAAAAACCCCGCCGCCGGCGACTTTACGTCGATCCAAGACGCCATCGATTCCCTACCCTTCATTAATTTGATTAGAGTTGTGATCAAGGTTCATGCAGGAGTATACAAAGAAAAAGTAATCATACCACCGTTCAAATCGTTCATAACAATCGAAGGAGCAGGGGCAGCCAAAACGATCGTTCAATGGGGGGACACAGCACAAACACCAGGCCCAAAGGGGCAGCCGTTGGGGACCTATAACTCCGCAACATTCGCAGTAAATTCCCCTTATTTTATAGCCAAAAACATCACATTCAAGAACACCACCCCTGTACCACCACCAGGGGCGATAGGAAAGCAAGCGGTGGCGTTCAGAATCTCAGGGGACACGGCGGCATTCTACGGATGCAGATTCTTAGGAGCTCAGGACACACTGTACGACCATCTGGGTCGGCATTATTACAAGGATTGTTACATCGAAGGGTCAGTGGACTTCATTTTTGGAAATGGGTTGTCTCTGTTTGAGGGGTGTCACGTGCACGCAATAGCGAGGTACACAGGGGCGTTGACAGCGCAGGGGAGAAGCAGCCTGCTGGAGGACACAGGGTTCTCATTCGTAAACTGTAAGGTCACGGGGTCTGGAGCGCTGTACTTGGGAAGGGCATGGGGGCCCTTCTCTAGGGTCGTCTTCGCTTACACTTACATGGACAATATCATCATTCCCAAAGGCTGGTACAATTGGGGCGATCCCAATCGCGAAATGACTGTGTTCTACGGGCAATACAAATGTACAGGAGAAGGAGGTAGGTTTGCAGGCAGAGTTTCATGGTCCAGAGAGCTCACTGACGAGGAAGCCAAGCCTTTTATTTCGCTTAGCTTCATCGATGGCTCTGAATGGATCAAAATTTAA 1152 48.52 MSKLQPPFGFSLLLLLLLLLLLLTQTHCHTKGIRPKKSPRTILPKNSTKTQFSEQQFMKWVKFVGSLKHSVFRTAKNKLFPSYTLHVAKNPAAGDFTSIQDAIDSLPFINLIRVVIKVHAGVYKEKVIIPPFKSFITIEGAGAAKTIVQWGDTAQTPGPKGQPLGTYNSATFAVNSPYFIAKNITFKNTTPVPPPGAIGKQAVAFRISGDTAAFYGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIARYTGALTAQGRSSLLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGEGGRFAGRVSWSRELTDEEAKPFISLSFIDGSEWIKI 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9501814 9504150 + Cp4.1LG04g10540.1 Cpe04g01091 468653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01091 383 Gene3D - 81 383 IPR012334 -
Cpe04g01091 383 PANTHER PECTINESTERASE 13 382 - -
Cpe04g01091 383 Pfam Pectinesterase 87 377 IPR000070 GO:0030599|GO:0042545
Cpe04g01091 383 ProSitePatterns Pectinesterase signature 2. 240 249 IPR033131 -
Cpe04g01091 383 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 382 - -
Cpe04g01091 383 SUPERFAMILY Pectin lyase-like 80 382 IPR011050 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01091 Cpe18g00395 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01091 Cpe-Chr4:9501814 Cpe07g00413 Cpe-Chr7:2683469 6.54E-99 dispersed
Cpe01g00677 Cpe-Chr1:3955450 Cpe04g01091 Cpe-Chr4:9501814 5.17E-173 transposed
Cpe02g01530 Cpe-Chr2:13015590 Cpe04g01091 Cpe-Chr4:9501814 8.23E-43 transposed
Cpe03g00212 Cpe-Chr3:1059808 Cpe04g01091 Cpe-Chr4:9501814 2.44E-86 transposed
Cpe16g00064 Cpe-Chr16:1270114 Cpe04g01091 Cpe-Chr4:9501814 2.48E-74 transposed
Cpe18g00290 Cpe-Chr18:4447301 Cpe04g01091 Cpe-Chr4:9501814 3.74E-89 transposed
Cpe18g00395 Cpe-Chr18:5184289 Cpe04g01091 Cpe-Chr4:9501814 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01091 K01051 - csv:101215894 699.508