Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe04g01092 | ATGGGGAGAGCCACCAGATGGCTGAAGAACTTGTTTGGGGTTAAGAAAGAAAAACAACCCACCATGGAAAATTCCACCTCCGCCTTCATGAAGGATAAGAACCCCACTTCTAATTTCGTCGGAGACGCCCAACTCTGCAACAATCCGGCTACAATACCGCCCAATTTATCCGCCGCTGAGGCCGCTTGGCTCAAATCCTTCTACTCCGAAACAGAGAAGGAACAGAGCAAGCACGCTATAGCAGTCGCTGCAGCCACTGCTGCTGCTGCTGATGCTGCGGTTGCTGCAGCACAAGCTGCCGTGGCTGTTGTCCGGCTCACTAGCCATGGGCGAGGTACTATGTTCGGTGGCGGCCGAGAGAGATGGGCCTCTGTCAAGATTCAAACTTGCTTCAGAGGGTTTCTGGCGAGAAAAGCACTGAGAGCGCTTAAAGGACTGGTGAAATTACAGGCGCTTGTGAGAGGATATTTGATTCGTAAACAAGCAACGGCAACTCTTCATAGTATGCAAGCTTTAATCAGAGCTCAAGCCACCGTTCGATCTCAGAGAACTCGCAGATTTGAACTCCAAGCTCGAAAATCAACGGAGCGGTTTGACGACACAAGGAGTGAGCACACAGCTTCAGTACACAGCAGAAGGCTTTCATCTTCTTTTGACAACACACCATTTACAGCGCTTGAAGAAAGCCCCAAAATCGTTGAAATGGACACCGGCCGACCAAAATCCTGGTCACGCCGGACGAACACGTCGGCGTCGGAATTTGGCGACGACCCATTTCACCAAACGTTGTCGTCTCCACTCCCCTGTCGAACTCCATCGCGTTTGCAGATTCCTGATTGCCGGCATGATTCCGACTGGGGTCTCACTGGCGACGAGTGTCGTTTGATCTCGACAGCGCAGAGCACTCCACGATTCGTCAGCTCCGGCAGATCCAATGGCCCTCCGACGCCAGCGAAGAGCATGTGTGCAGATAATTTCTTCAGAGGGTACTTGAATTTCCCTAATTACATGGCGAATACTCAATCGTTTATGGCGAAATTGAGGTCCCAGAGTGCTCCGAAACAGAGGCCGGAGCCAGGCTCGAAGAAGAGGCTTTCGTTGAATGAATTAATGGAATCGAGAAGCAGTCTTAGTGGGGTTCGAATGCAGAGGTCTTGTTCGCAGGTACAAGAAGCCATTAATTTCAAGAATGCTGTGATGAGCAAACTGGATAGACCATCGGAATTCAACAACTTGCAGAGAAGATCATGA | 1251 | 50.6 | MGRATRWLKNLFGVKKEKQPTMENSTSAFMKDKNPTSNFVGDAQLCNNPATIPPNLSAAEAAWLKSFYSETEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGRERWASVKIQTCFRGFLARKALRALKGLVKLQALVRGYLIRKQATATLHSMQALIRAQATVRSQRTRRFELQARKSTERFDDTRSEHTASVHSRRLSSSFDNTPFTALEESPKIVEMDTGRPKSWSRRTNTSASEFGDDPFHQTLSSPLPCRTPSRLQIPDCRHDSDWGLTGDECRLISTAQSTPRFVSSGRSNGPPTPAKSMCADNFFRGYLNFPNYMANTQSFMAKLRSQSAPKQRPEPGSKKRLSLNELMESRSSLSGVRMQRSCSQVQEAINFKNAVMSKLDRPSEFNNLQRRS | 416 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 9504874 | 9506664 | - | Cp4.1LG04g10240.1 | Cpe04g01092 | 468654 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe04g01092 | 416 | Pfam | Protein of unknown function (DUF4005) | 305 | 381 | IPR025064 | - | |
| Cpe04g01092 | 416 | MobiDBLite | consensus disorder prediction | 235 | 267 | - | - | |
| Cpe04g01092 | 416 | MobiDBLite | consensus disorder prediction | 193 | 214 | - | - | |
| Cpe04g01092 | 416 | Pfam | IQ calmodulin-binding motif | 121 | 141 | IPR000048 | GO:0005515 | |
| Cpe04g01092 | 416 | Pfam | IQ calmodulin-binding motif | 147 | 161 | IPR000048 | GO:0005515 | |
| Cpe04g01092 | 416 | MobiDBLite | consensus disorder prediction | 193 | 209 | - | - | |
| Cpe04g01092 | 416 | MobiDBLite | consensus disorder prediction | 242 | 267 | - | - | |
| Cpe04g01092 | 416 | Gene3D | - | 117 | 171 | - | - | |
| Cpe04g01092 | 416 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 407 | - | - | |
| Cpe04g01092 | 416 | PANTHER | - | 1 | 407 | - | - | |
| Cpe04g01092 | 416 | ProSiteProfiles | IQ motif profile. | 144 | 171 | IPR000048 | GO:0005515 | |
| Cpe04g01092 | 416 | SMART | iq_5 | 119 | 141 | IPR000048 | GO:0005515 | |
| Cpe04g01092 | 416 | SMART | iq_5 | 142 | 163 | IPR000048 | GO:0005515 | |
| Cpe04g01092 | 416 | ProSiteProfiles | IQ motif profile. | 120 | 148 | IPR000048 | GO:0005515 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe04g01092 | Cpe18g00396 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe03g01460 | Cpe-Chr3:11630733 | Cpe04g01092 | Cpe-Chr4:9504874 | 1.52E-38 | dispersed | |
| Cpe04g01092 | Cpe-Chr4:9504874 | Cpe08g00280 | Cpe-Chr8:1807896 | 7.26E-38 | dispersed | |
| Cpe14g00120 | Cpe-Chr14:648979 | Cpe04g01092 | Cpe-Chr4:9504874 | 6.98E-28 | dispersed | |
| Cpe12g00644 | Cpe-Chr12:6309281 | Cpe04g01092 | Cpe-Chr4:9504874 | 1.06E-84 | wgd | |
| Cpe17g00525 | Cpe-Chr17:4376627 | Cpe04g01092 | Cpe-Chr4:9504874 | 8.99E-06 | wgd | |
| Cpe18g00396 | Cpe-Chr18:5187816 | Cpe04g01092 | Cpe-Chr4:9504874 | 2.02E-10 | wgd | |
| Cpe02g01697 | Cpe-Chr2:13961624 | Cpe04g01092 | Cpe-Chr4:9504874 | 4.29E-71 | wgd | |
| Cpe03g01092 | Cpe-Chr3:9011328 | Cpe04g01092 | Cpe-Chr4:9504874 | 2.72E-86 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe04g01092 | - | - | cmax:111495188 | 729.169 |