Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01099 ATGGACGATCCCGACCACCACCAACTCCACCAAGCCGATTCTCTTTCTGGTTTATCCATACTCAGCACCGACGATTCCAGAACCTCCTCCAGTTCCGGCGAGATTCCTGCTTCTATTCGCACCGAGCCGATGAAGGTGTCGGAAGCAGGGAGGAGGAAGTGCGTGGGGAGGAACAATAGAAGCGGACTGCACTGGGGGCTCACTTCGGTTATTGGACGGCGGATGGAGATGGAGGACGCTATCGCGGTGAAGCCGGGATTAATGTCTTCAAGATGCAACCACGTCGGAGGTTGTACGGCTCCAGATTCCAGAACCTCGGGTGAGATCTCGCCCGTTCATTTCTTCGCCGTGTACGATGGTCACGGCGGCTCTCAGATTATCGTTTCCAATTGCGGCGACTCTCGGGCGGTTCTTTTCCAGCGGAATAAAGCGATTCCATTAACAGTCGATCAAAAGCCTGATAGAAAGGATGAACTGATGAGAATTGAGAGAGATGGAGGCAAAGTCATAAACTGGATGGGCGCTAGAGTGCTTGGAGTTCTTGCCATGTCAAGAGCCATAGGGGATCGATATCTTCGGCCGTGGATAATTCCAGTCCCGGAAGTTAGTTTCACCACCAGGAGTGATGAGGATGAATGTGTGATTCTGGCAAGCGACGGGCTCTGGGATGTAATGACGAATGAAGAGGTTGGGCAGGTGGCTTGCCATCTTCTCAGGCGGCACCGCAGGTCGTCGACAACCGATAACACACCTCCGGCGCAAATTGTTGCTAATAATCTCACTGAAATGGCATACGGAAGAAACAGTTCTGATAACATTTCTGTCATTGTCATCGATCTGAAAGCCAGGAAAGGACACCCACAGAGGCAGTGA 873 52.0 MDDPDHHQLHQADSLSGLSILSTDDSRTSSSSGEIPASIRTEPMKVSEAGRRKCVGRNNRSGLHWGLTSVIGRRMEMEDAIAVKPGLMSSRCNHVGGCTAPDSRTSGEISPVHFFAVYDGHGGSQIIVSNCGDSRAVLFQRNKAIPLTVDQKPDRKDELMRIERDGGKVINWMGARVLGVLAMSRAIGDRYLRPWIIPVPEVSFTTRSDEDECVILASDGLWDVMTNEEVGQVACHLLRRHRRSSTTDNTPPAQIVANNLTEMAYGRNSSDNISVIVIDLKARKGHPQRQ 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9547830 9550411 - Cp4.1LG04g10270.1 Cpe04g01099 468661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01099 290 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Cpe04g01099 290 ProSiteProfiles PPM-type phosphatase domain profile. 64 280 IPR001932 -
Cpe04g01099 290 SMART PP2C_4 54 278 IPR001932 -
Cpe04g01099 290 MobiDBLite consensus disorder prediction 1 52 - -
Cpe04g01099 290 Pfam Protein phosphatase 2C 124 273 IPR001932 -
Cpe04g01099 290 SUPERFAMILY PP2C-like 58 281 IPR036457 -
Cpe04g01099 290 PANTHER ALPHABET, ISOFORM E-RELATED 41 126 - -
Cpe04g01099 290 PANTHER ALPHABET, ISOFORM E-RELATED 123 290 - -
Cpe04g01099 290 CDD PP2Cc 66 280 IPR001932 -
Cpe04g01099 290 Gene3D - 53 124 IPR036457 -
Cpe04g01099 290 Gene3D - 125 288 IPR036457 -
Cpe04g01099 290 MobiDBLite consensus disorder prediction 12 37 - -
Cpe04g01099 290 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 123 290 - -
Cpe04g01099 290 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 41 126 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01099 Cpe18g00401 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01099 Cpe-Chr4:9547830 Cpe02g01730 Cpe-Chr2:14166055 9.17E-07 dispersed
Cpe17g00528 Cpe-Chr17:4395420 Cpe04g01099 Cpe-Chr4:9547830 2.71E-29 wgd
Cpe18g00401 Cpe-Chr18:5219854 Cpe04g01099 Cpe-Chr4:9547830 4.26E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01099 K14497 - csv:101220173 305.834