Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01110 ATGGGTTGCGTTCATTCGAGGGTTTGTTTTGGCGAGGCTACAACTCCAAGATCTTCAAGAATTGCCGACACCCAAAATGCCAATACCGCCGTTGAAATCGACGCGATCTCTACTTCGTCTTCTGATAGCCAAGAAGATGAAATCCGCAACCAACTGAATTCAAACAACAGAGATTCAGAAGTTGGAATAACGAGGCTGTCGAGAATTTCAGCGCAGTTCTTGCCTGCTGATGGGTCTCGAACCGTCAAAGTCCCTTCTGGAAACTTCGAATTGCGATATTCGTTTCTTTCGCAAAGAGGGTACTATCCCGATGCTCTCGATAAGGCGAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAACCCAGATGACCATTTCTTTGGAGTTTTCGACGGGCATGGGGAATTCGGAACACAGTGCTCGCAGTTTGTAAAACGAAAGCTCTGTGAAAATTTACTTAGGAATAGTAGGTTCCACAGTGACGCAGTTGAGGCTTGCCATGCGGCCTATTTGACGACTAATTCACAATTACACGCAGATATGTTGGATGATAGCATGAGTGGTACTACTGCTATTACTGTTTTAGTTAGAGGTACGACTATATATGTTTCTAATTCAGGTGATTCGAGAGCGGTTTTAGCCGAGCTGAGAGGAAAGGAAATTGTGGCTGTTGACCTCTCGATCGATCAAACCCCGTTCCGAACCGATGAACTCGAACGTGTTAAGCTTTATGGTGCCAGAGTTCTTACACTTGATCAGATTGAGGGGCTGAAGAATCCTGATGTTCGGTGCTGGGGTACTGAAGAAGGAGATGATGGTGATCCTCCTAGGCTATGGGTGCCTAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATAGGTGACTCAATTGCTGAGACTATTGGAGTAGTTGCTACACCGGAAATTGTTGTTCTAGAGCTGACACCGGATAATCCTTTCTTTGTCGTTGCTAGTGATGGGGTTTTCGAGTTTCTTTCGAGCCAAACTGTGGTCGACATGTTTAAGGAACTAGTGAATGATCAAGCAACCTTCAATATATTGAATCTCTTTCTTCATGTTATCTTCCAGGTTGCTAAACATAAAGATCCTCGTGATGCTTGTGCTGCGATTGTGGCCGAGTCTTACAGACTTTGGCTTCAATATGAGACTCGAACTGATGATATCACTGTTATCGTGGTGCACGTTAATGGGCTAACCAATACGGTTACTAGTGAATCGACAAGATCCAGTGGAGGTGGTTTTGTTCGATCCACTGTTCCTCAAGTTTTGGAGGTGACAGGATCAGAATCTCCCTCTACCTTTGGCTGGAATCGAAACAACCGTGCAAGGCAAGATTTGTCACGGGCACGTCTCAGGGCTATCGAAAGTTCCCTAGAGAATGGGCAGGTCTGGGCGCCTCCATCTCCAGCTCACAGGAAGACATGGGAAGAAGAAGCACATATTGAACGAGCATTACACGATCATTTCCTCTTCAGAAAATTAACCGATTCTCAGTGCCAAGTTTTATTAGATTGCATGCAAAGAGTCGAGGTCATACCGGGGCAAATTGTAGTCGAACAAGGTGGCGAAGGTGACTGTTTTTATGTAGTTGGAAGCGGAGAGTTTGAGGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTTCCTCGAATTCTGCAACACTATACAGCTGAGAAGCTATCTTCCTTTGGCGAACTGGCTTTGATGTATAACAAGCCACTTCAAGCCTCCGTACGTGCTGTGACTAGTGGAACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCGAACTTGTCGTCCCTGAAATTGCTTCGATCTGTGGACCTTCTGTCGAGGTTAACGATCTTGCAATTGAGTCACATTGCAGATTGCCTTTCTGAAGTTACCTTCTCAGATGGGCAGTTGATAGTTGATGGGACCGAAGGTTTACGTGCACTTCACATTATTCATAAGGGCCAAGTGAGGATTGCTTTTGATGCAGAGTTAATGAGCAATTCAAATATTTACGAGGACGATGTTGCACGGAATGGTAAAGAGATCTCAGTTATTAAGAAAGAGGGAAGTTATTTTGGCGAATGGGCGCTTCTTGGTGAGCATATTGGCTTCTTACGCGCAGTTGCTGTGGGAGATGTCGTATGCGCTATTTTAACGAAGGAAAAGTTTGAATCAGTTGTTGGTCCTTTACCAAAGATCTCTCAAGATGACCAAAAGGAACATTCTTCAGACTCCCTCCATCACTCTGCTACAATTATGGATATTTCAGCTCTTTCAAAAGTTGAGCTTGCTGATCTGGAGTGGAAAACGTGCTTATATTCCACAGAATACAGTGAGATCGGGCTAGTTCGGTTAAGGAACACAGAAAGTATGCTTAGTTTAAAAAGGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGAAGAACAAATGTTGAAGGAGAAAAATCTTATGAAAACCGTCAGTTCTTCAGCTTGTGTGCCGCAACTCCTCTGCACTTGTTTAGATCAATCACATGCTGGCATATTGCTGAAAACATGCCTTGCTTGTCCTTTCGCTTCGATACTCCACGTTCCACTCGACGAGTCTTCTGCTCGTTTCTATGCAGCCTCTCTTGTTATAGCACTGGAAGATTTGCACAAGCTTGGTGTTCTCTACAGAGGAATCTCCCCCGATGTTCTAATGCTGGATCAAACTGGACGGATACAGTTAGTCGACTTCCGATTCGGGAAAAGAACGTTGGGTGAGAGAACGTATACTATGTCGGGGAGGGAAGAGTTCTTAGCACCTGAGATAGTTCAGGGCAATGGCCATGGTTTTGCTGCTGACTGGTGGGCGTTGGGAGTCTTAATCTATTTCATGCTGAAAGGTGAAACGCCATTTGGATCGTGTCGACAAAGCGAGCTCGATATTTCTTGTCTTCCCGAGATTATCAGTCCTGAAGCCACCGATCTCATCGTCAAGTTACTTGAAGTTGATGAGAAGAAACGACTTGGCAACGAGAACGAAAACTCGGTTGGAAGTCATCCCTGGTTTGATGGTGTCGATTGGAAGGGGATCCGTGACAGTACCTTTCCCGTTCCTGACTCGATCACTTCTCGTGTGGCTCAATATTTGGCGAGCTACCCTGAAGATTCCTGTGGTTCTTTAGTCGAACCACCTCAAGATCCCGACGAGTCGGATGCCCCCGAGTGGATCAGCGAGTGGTAG 3255 45.31 MGCVHSRVCFGEATTPRSSRIADTQNANTAVEIDAISTSSSDSQEDEIRNQLNSNNRDSEVGITRLSRISAQFLPADGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNNPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADMLDDSMSGTTAITVLVRGTTIYVSNSGDSRAVLAELRGKEIVAVDLSIDQTPFRTDELERVKLYGARVLTLDQIEGLKNPDVRCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTPDNPFFVVASDGVFEFLSSQTVVDMFKELVNDQATFNILNLFLHVIFQVAKHKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHVNGLTNTVTSESTRSSGGGFVRSTVPQVLEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWAPPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRILQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSRLTILQLSHIADCLSEVTFSDGQLIVDGTEGLRALHIIHKGQVRIAFDAELMSNSNIYEDDVARNGKEISVIKKEGSYFGEWALLGEHIGFLRAVAVGDVVCAILTKEKFESVVGPLPKISQDDQKEHSSDSLHHSATIMDISALSKVELADLEWKTCLYSTEYSEIGLVRLRNTESMLSLKRFTRQKVKRLGLEEQMLKEKNLMKTVSSSACVPQLLCTCLDQSHAGILLKTCLACPFASILHVPLDESSARFYAASLVIALEDLHKLGVLYRGISPDVLMLDQTGRIQLVDFRFGKRTLGERTYTMSGREEFLAPEIVQGNGHGFAADWWALGVLIYFMLKGETPFGSCRQSELDISCLPEIISPEATDLIVKLLEVDEKKRLGNENENSVGSHPWFDGVDWKGIRDSTFPVPDSITSRVAQYLASYPEDSCGSLVEPPQDPDESDAPEWISEW 1084
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9625043 9630945 - Cp4.1LG04g10070.1 Cpe04g01110 468672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01110 1084 SMART cnmp_10 626 760 IPR000595 -
Cpe04g01110 1084 SMART cnmp_10 500 623 IPR000595 -
Cpe04g01110 1084 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Cpe04g01110 1084 Gene3D Phosphorylase Kinase; domain 1 780 865 - -
Cpe04g01110 1084 Gene3D Jelly Rolls 614 761 IPR014710 -
Cpe04g01110 1084 Pfam Cyclic nucleotide-binding domain 520 608 IPR000595 -
Cpe04g01110 1084 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 28 1074 - -
Cpe04g01110 1084 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 28 1074 - -
Cpe04g01110 1084 SUPERFAMILY PP2C-like 81 407 IPR036457 -
Cpe04g01110 1084 PRINTS cAMP-dependent protein kinase signature 571 580 - -
Cpe04g01110 1084 PRINTS cAMP-dependent protein kinase signature 536 550 - -
Cpe04g01110 1084 PRINTS cAMP-dependent protein kinase signature 738 750 - -
Cpe04g01110 1084 PRINTS cAMP-dependent protein kinase signature 521 535 - -
Cpe04g01110 1084 Gene3D - 86 406 IPR036457 -
Cpe04g01110 1084 ProSiteProfiles cAMP/cGMP binding motif profile. 500 608 IPR000595 -
Cpe04g01110 1084 ProSiteProfiles cAMP/cGMP binding motif profile. 626 759 IPR000595 -
Cpe04g01110 1084 CDD CAP_ED 626 750 IPR000595 -
Cpe04g01110 1084 SUPERFAMILY cAMP-binding domain-like 480 609 IPR018490 -
Cpe04g01110 1084 Gene3D Transferase(Phosphotransferase) domain 1 866 1041 - -
Cpe04g01110 1084 ProSiteProfiles PPM-type phosphatase domain profile. 92 405 IPR001932 -
Cpe04g01110 1084 MobiDBLite consensus disorder prediction 1061 1084 - -
Cpe04g01110 1084 SMART serkin_6 788 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01110 1084 ProSiteProfiles Protein kinase domain profile. 781 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01110 1084 SUPERFAMILY cAMP-binding domain-like 617 748 IPR018490 -
Cpe04g01110 1084 CDD CAP_ED 500 608 IPR000595 -
Cpe04g01110 1084 Pfam Protein kinase domain 792 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01110 1084 Gene3D Jelly Rolls 467 608 IPR014710 -
Cpe04g01110 1084 CDD PP2Cc 108 405 IPR001932 -
Cpe04g01110 1084 Pfam Protein phosphatase 2C 115 352 IPR001932 -
Cpe04g01110 1084 SUPERFAMILY Protein kinase-like (PK-like) 782 1041 IPR011009 -
Cpe04g01110 1084 SMART PP2C_4 88 403 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01110 Cpe18g00410 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01110 Cpe-Chr4:9625043 Cpe12g00239 Cpe-Chr12:1606039 2.96E-132 dispersed
Cpe18g00410 Cpe-Chr18:5284713 Cpe04g01110 Cpe-Chr4:9625043 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62362 PF00069 Pkinase 5.40E-32 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01110 - - csv:101217861 1848.56