Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01128 ATGTCGTCTCCTGCTCCCATCTCGCCGCCGGGGACTAACTCGACCTCACCCCCACCACCGACCACGGATGCACCACCTCCAGCATCTCCATCTCTCTCACCACCTCCTCCTGCTTCATCGCCGCCGCCTCCGAACAGTACCACTCCATCTCCGCCTACTTCTTCTCCTTCCCCGCCGGACGTGCCTTCGAGCTCTCCCCCGCCGCCGCCTACCGACTCGACAGCGCCACCGCAACTTCCGAGTCCGACGCCGCCATCCAATTCTAGTACACCTGTGAATCCTGGAGGGAATCAGGCTCCACCGTCGGAAACGGCGCCGTCTCCCTCAACATCGTCGGGAGTTTCGGCGGGACTTGTGTCTGGGGTTGCCGTTGGAGTGGTGGTGGTGGTTGTAGCGTTGATTGCTATGTGTTTTTATCTAAGAAAGAAGAGGAGACGCGACGAGGAGGCGTACTACCGGCCACCGCATCCGCCTGCGCCACCGGCGGCGTTTAAAGACGGCCCATACGGTCCCCAACAGCACCATTGGCAATCACATCCGCCGCCGCCAGGGGATCATATCGCGGGGGCAGTACCAAAGCCGTCTCCTCCGCCAGCATCACGGCCACCGCCGTCACCCCCGATTATAAACAGTAGCGGAGGGTCTGGATCTAATTATTCAGGGTCTGAAAATTCGTTGGCTCCAGCTCCATCTTCTGTTCCCTTGGGGTTCTCACAGAGCAGTTTCACTTACGAAGAATTAGCAATGGCGACAGATGGGTTTTCAGAAGCCAATCTCCTCGGACAAGGTGGGTTTGGTTATGTGCATAAAGGAGTTCTTCCTAACGGAAAGGAAGTGGCAGTGAAACAACTTAAAGCTGGAAGCGGACAAGGGGAGCGTGAATTCCAAGCAGAAGTTGAAATCATCAGCCGAGTTCATCATAGGCATCTTGTTTCTTTGGTCGGATATTGCATCACTGGCTCCCAAAGATTGCTGGTTTATGAATTCGTTCCCAACAACACATTGGAGTTTCACTTGCACGGTAATCCTAAGATCATTCATCGTGACATCAAAGCAGCAAACATACTTTTGGATCTCAAATTCGAAGCAAAGGTTGCAGATTTTGGGCTTGCCAAGTTGTCTTCTGATGTTAATACCCATGTTTCAACTCGAGTCATGGGAACTTTCGGGTATCTTGCTCCTGAATACGCTTCAAGTGGGAAACTAACTGAGAAATCAGATGTGTTCTCCTATGGAGTAATGCTTCTGGAGTTGATTACTGGACGCAGACCTGTTGATCCAACTCAATCATTCATGGACGATGGATTGCTCGATTGGGCAAGGCCATTACTACTTCGGGCAACAGAAAATGGAAACTACGACGGTTTGGTAGATCCAAAGCTGCGAGATAACCACGACCACAACGAGATGGCGCGCATGGTTGCTTGCGCTGCGGCCTGTGTGCGTCATTCGGCGAGGCGTCGACCACGGATGAGTCAAGTGGTTCATGCTCTTGAAGGAGAAGCCTCGCTTTCTGATCTGAACGAAGGAATCCGACCTGGACATAGCACTGTGTACAGTTCTTATGGAAGCTCCGACTACGACACGGCTCAGTACAACGAGGATCTGAAGAAGTTTAGGAAGATGGCGTTGGCGAGCCAGGAGTACGGCAGCGAGTACAGCGAGCCGACAAGCGAGTATGGGCTGTACCCATCTGGGTCGAGTGGCGATGGGCAAACAACGAGGGAAATGGAGACGAGAACGATGAAGAAAGAAAGTGGATGA 1764 53.0 MSSPAPISPPGTNSTSPPPPTTDAPPPASPSLSPPPPASSPPPPNSTTPSPPTSSPSPPDVPSSSPPPPPTDSTAPPQLPSPTPPSNSSTPVNPGGNQAPPSETAPSPSTSSGVSAGLVSGVAVGVVVVVVALIAMCFYLRKKRRRDEEAYYRPPHPPAPPAAFKDGPYGPQQHHWQSHPPPPGDHIAGAVPKPSPPPASRPPPSPPIINSSGGSGSNYSGSENSLAPAPSSVPLGFSQSSFTYEELAMATDGFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRRPVDPTQSFMDDGLLDWARPLLLRATENGNYDGLVDPKLRDNHDHNEMARMVACAAACVRHSARRRPRMSQVVHALEGEASLSDLNEGIRPGHSTVYSSYGSSDYDTAQYNEDLKKFRKMALASQEYGSEYSEPTSEYGLYPSGSSGDGQTTREMETRTMKKESG 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9750604 9753534 - Cp4.1LG04g09960.1 Cpe04g01128 468690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01128 587 MobiDBLite consensus disorder prediction 550 575 - -
Cpe04g01128 587 SUPERFAMILY Protein kinase-like (PK-like) 239 498 IPR011009 -
Cpe04g01128 587 Gene3D Phosphorylase Kinase; domain 1 226 329 - -
Cpe04g01128 587 MobiDBLite consensus disorder prediction 1 115 - -
Cpe04g01128 587 SMART serkin_6 254 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01128 587 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 12 342 - -
Cpe04g01128 587 MobiDBLite consensus disorder prediction 550 587 - -
Cpe04g01128 587 MobiDBLite consensus disorder prediction 210 231 - -
Cpe04g01128 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
Cpe04g01128 587 ProSitePatterns Protein kinases ATP-binding region signature. 260 282 IPR017441 GO:0005524
Cpe04g01128 587 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 342 577 - -
Cpe04g01128 587 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 12 342 - -
Cpe04g01128 587 Gene3D Transferase(Phosphotransferase) domain 1 336 510 - -
Cpe04g01128 587 MobiDBLite consensus disorder prediction 90 115 - -
Cpe04g01128 587 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 342 577 - -
Cpe04g01128 587 ProSiteProfiles Protein kinase domain profile. 254 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01128 587 MobiDBLite consensus disorder prediction 1 89 - -
Cpe04g01128 587 MobiDBLite consensus disorder prediction 148 231 - -
Cpe04g01128 587 Pfam Protein kinase domain 338 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01128 587 MobiDBLite consensus disorder prediction 185 209 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01128 Cpe07g01010 CCT
Cpe04g01128 Cpe18g00431 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00667 Cpe-Chr1:3898590 Cpe04g01128 Cpe-Chr4:9750604 3.53E-151 dispersed
Cpe04g01128 Cpe-Chr4:9750604 Cpe05g01252 Cpe-Chr5:8763463 4.79E-154 dispersed
Cpe16g00234 Cpe-Chr16:4427342 Cpe04g01128 Cpe-Chr4:9750604 2.39E-67 dispersed
Cpe18g00431 Cpe-Chr18:5399968 Cpe04g01128 Cpe-Chr4:9750604 0 wgd
Cpe04g01128 Cpe-Chr4:9750604 Cpe07g01010 Cpe-Chr7:9183558 2.40E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62363 PF00069 Pkinase 4.50E-23 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01128 - - csv:101222748 749.969