Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01144 ATGAATTTCAACTCCATTTTAAACCTCTCACTCCTCCTCCTTCTCCTCCGCCTCGCCGCCGCCACCGTCGGCCATGGCACCCTCTCTGACGCCGAAGCTCTCTATATCCGGCAGCGTCAGCTTCTGTACTATCGAGATGAGTTCGGCGACCGTGGCGAGGAAGTTACCGTCGACCCATCTCTCGTTTTCGAAAACGAAAGGATCAGAAACGCCTACATTGCACTTCAGGCTTGGAAACTCGCCATTTTGTCCGACCCTCTGAATCAAACAGCTAATTGGGTCGGATCTGATGTCTGCACCTACACCGGCGTTTACTGTGCTCCCGCATTGGACAACCCCAACATTCGTACTGTTGCCGGCATCGATCTCAATCACGGCGACATTGCCGGATACCTCCCTGAGGAGCTCGGTTTGCTTGTGGATCTAGCATTGTTCCACATCAACTCCAACAGATTCTGCGGCACTGTTCCTCACAAATTCGACCGTCTCAAGTTGCTTTACGAGTTGGATCTCAGTAATAATCGGTTCGCCGGGAGGTTTCCCGATGTGGTTCTCAGGCTTCCGATTCTCAAGTTTTTGGATCTGAGGTTTAACGAATTTGAAGGCAGTGTACCCAGAGAGCTGTTTGATAAGGATTTAGACGCCATTTTTATTAACCATAATCGGTTTAGATTCGAACTGCCGGATAATTTTGGGAACTCGCCGGTGTCGGTGATTGTTGTGGCCAACAATAACTTCCATGGGTGTTTGCCTAAGAGCTTGGGCAACATGACGAGGCTGAATGAGATCATTATGATGAACAATGGACTAAATTCTTGCTTGCCGCCGGTAATTGGGGCGTTGAAGAACTTGACAGTGTTCGATGTTAGTTCAAATCAGTTGGTGGGGCCATTGCCGGAGACTTTTGGAGGGCTCGTGAGTTTGGAGCAACTCAATGTAGCTAATAATTTTCTCTCTGGGAACATTCCGGGGAGTATTTGCGATTTGCCCAAGCTTCAGAACTTTACGTTCTCGAATAACTTCTTTTCCGGTGAGCCGCCGGAGTGTTTGAGGGTTCCGGAGTTCAGTGATCGGAGGAATTGCTTACCGGGACGGCCAATGCAGCGCCCAAGTGGGAAATGTAACTCGTTTTTGTCGAACCCTGTTGATTGTAATGCGTTTAAATGCGGCGGTTCTTCGTCTGTTACGCCTTCTTCTCCGTTTTCCCCTCCGGCTGATTCGCCCTCTTCGCCTCCATCACCGGTGGCGCCGTCGTCTCCTCCGTCTTTCCCGTCACCAGTGGCGCCGTCATCACCTCCGTCGCCGTCTCAGTCTCCGGGTACTCCGACGGAACCGCCATTGTCGCCCCATTTTCCTCCACTATCGCCACCGCCGTCGCCTTCATCTCCGACTACACCTACAACCCCCTCATCGCCGCCTCATTTTCCATCTCCATCTGCTCCGTCGCCTTCATCTCCGACTACACCTACAACCCCCTCATCGCCACCTCATTTTCCATCTCCATCTGCGCCGTCACCTTCATCACCACATCAAGGTCCTTCTCCGCCGTCACTACCCTCACCTTCCTCGCCGCCTCTAGGTCATACTCCACCATCTGAACCCTCACAACCATCGCCACCTCACAGTCATACCCCCCCAACTCCAACTTCACCAACCAAACCCTCGCCATCATTACCGCCACAAGGCCACACTCCCCCTGGTCCTTCGCCGTCCGAGCCCTCACCATCATCGCCACCACAAGCCCATACTCCGCAATCTCCACCTTCACCGACTGAGCCCTCTCCTTCCTCGCCGCCATATGTCCACATTCCCCCGGCTGAGCCTTCTCCTCCTGGAATATCAGCACCGCCATTCCCAATTTACACTCCGCCTCCACCACATTTCCCTGATTTCCCTTCGCCGCCAAATACCCAACCTCCCGTCTACTGCCCACGATCCCCATATCCACCATCCCCTCCATCCTACTCCCCAAACCCACCTGATTCTCACTTCACCTCCCCCCCGCCGCCGCCACCTGTTTATTCCCCACCCCCTGTTCATACATCGCCGTCCCCTCTCCCCTGCACAAAACCTCCATCTCCCCCACCAGGTGCTCACTATTCAGAACCACCGCCTCCTCAGTCTTCAACGCCGTCTTCCCCGATCCACTACAACTCCCCACCACCACCACCACCACCACCACCACCGGGGCAATATCAATCTCCTCCCTCACCTTCACCTCCGGTCAGCGTGTATCCGCCACTATCTCCCTCACCCCCACCTCCAGTGATTTACGAAAGCCCACCGCCGCCTCCAACTCCAGTATACGGTGGCCCACTGCCTCCAATCTACGGAGTTCCCTACGCCTCTCCTCCACCCCCACCCTTCTATTAA 2373 54.36 MNFNSILNLSLLLLLLRLAAATVGHGTLSDAEALYIRQRQLLYYRDEFGDRGEEVTVDPSLVFENERIRNAYIALQAWKLAILSDPLNQTANWVGSDVCTYTGVYCAPALDNPNIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFDRLKLLYELDLSNNRFAGRFPDVVLRLPILKFLDLRFNEFEGSVPRELFDKDLDAIFINHNRFRFELPDNFGNSPVSVIVVANNNFHGCLPKSLGNMTRLNEIIMMNNGLNSCLPPVIGALKNLTVFDVSSNQLVGPLPETFGGLVSLEQLNVANNFLSGNIPGSICDLPKLQNFTFSNNFFSGEPPECLRVPEFSDRRNCLPGRPMQRPSGKCNSFLSNPVDCNAFKCGGSSSVTPSSPFSPPADSPSSPPSPVAPSSPPSFPSPVAPSSPPSPSQSPGTPTEPPLSPHFPPLSPPPSPSSPTTPTTPSSPPHFPSPSAPSPSSPTTPTTPSSPPHFPSPSAPSPSSPHQGPSPPSLPSPSSPPLGHTPPSEPSQPSPPHSHTPPTPTSPTKPSPSLPPQGHTPPGPSPSEPSPSSPPQAHTPQSPPSPTEPSPSSPPYVHIPPAEPSPPGISAPPFPIYTPPPPHFPDFPSPPNTQPPVYCPRSPYPPSPPSYSPNPPDSHFTSPPPPPPVYSPPPVHTSPSPLPCTKPPSPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPPPPPPGQYQSPPSPSPPVSVYPPLSPSPPPPVIYESPPPPPTPVYGGPLPPIYGVPYASPPPPPFY 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9833112 9835484 - Cp4.1LG04g09800.1 Cpe04g01144 468706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01144 790 MobiDBLite consensus disorder prediction 401 777 - -
Cpe04g01144 790 Pfam Leucine rich repeat N-terminal domain 74 106 IPR013210 -
Cpe04g01144 790 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 21 528 - -
Cpe04g01144 790 Pfam Leucine rich repeat 283 340 IPR001611 GO:0005515
Cpe04g01144 790 Gene3D Ribonuclease Inhibitor 71 359 IPR032675 -
Cpe04g01144 790 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 528 - -
Cpe04g01144 790 MobiDBLite consensus disorder prediction 393 777 - -
Cpe04g01144 790 SUPERFAMILY L domain-like 80 351 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01144 Cpe-Chr4:9833112 Cpe18g00446 Cpe-Chr18:5474595 0 dispersed
Cpe04g01144 Cpe-Chr4:9833112 Cpe07g00999 Cpe-Chr7:9122216 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01144 - - cmax:111499732 761.911