Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01145 ATGGGTTCGTTGAAAAGTGAACAACATGTGAACTTTGCTGCTCCAAGACCATTCGTGAACAGGCTGAAATCAGATCTGAAAGAGACGTTTTATCCCGATGATCCCTTCAGGCAGTTTCGTGATGATAGGCCGACGCACCAACTCAGAAAGGCCGTCCAGTATTTCATCCCCATATTGGAATGGCTTCCTAAATACAATTTTAATATGTTTAAGTATGATTTGCTCGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCTAAGCTTGGCAGCCTCCCTCCCATCATCGGCCTTTATTCGAGCTTCGTTCCACCGCTTGTGTATGCGGTGTTTGGAAGCTCGAAGCATCTGGCGGTGGGTACGGTGGCGGCATGTTCGTTGCTAATAGCGGAAATCATCGGAGAAGTGGCGTCGCCGGAAGAAGACCCCACATTGTATCTACACCTGGTTTTAACAGCCACCTTAATCACCGGCGTCATGCAGACGGCCTTAGGGCTTCTACGATTGGGAATCTTGGTGGATTTCTTATCGCATTCAACGATCATAGGGTTTATGGGAGGAACAGCTGTGATCATTTGCCTGCAACAGCTGAAAGGCATATTCGGACTCACTCATTTCACCTCTAAAACCGACGTCTATTCGGTACTCCATGCCGTTTTCTCCCTTAGAAGTGAGTGGAGATGGCAAAGTGCTGTCACGGGCGTCGTCTTCCTTATCTTCCTCCAGTTTACTAGGTACCTGAGAGATAGAAACCCGAAGCTGTTTTGGGTATCAGCGATGGCTCCGATGGTGACAGTGATAGTCGGGTGTTTGGTTGCATATCTCGTCCATGGAAGTCAGCATGGAATCTTAACTGTGGGTCGCTTGAACAAAGGAATAAACCCTCCTTCTATTCACTCCTTGAACTTTGACCCAAAATACCTACCAGCTGTGGTACAAGCTGGTGCCATCACTGGCCTTGTGGCTTTGGCTGAAGGAATAGCAATTGGTCGAAGCTTTGCAATAATGAAAAACGAACAAGTCGATGGCAACAAAGAGATGGTAGCCTTCGGTTTGATGAACATTGTGGGATCTTTCACTTCCTGCTACTTAACCACTGGGCCATTCTCAAAGACTGCAGTGAACTTCAATGCTGGATGTAGAACAGCAATGTCAAACGTAGTAATGGCGGTCTTCATGGCTCTCACGCTCCTCTTTCTAGCTCCTCTCTTCAGCTACACTCCTCTTGTAGCCCTTTCCGCCATTATTATGTCCGCCATGTTTGGTTTGATCAAATACGAAGAAATATATCATCTTTTCAAGGTCGACAAGTTCGATTTCTGCATTTGTATGGCTGCTTTCTTGGGCGTTGCTCTATTGAGCATGGATGTTGGCTTAATGCTTTCGGTGGGTCTTGCTTTGCTGAGAGCTCTTCTTTACATGGCTAGACCAGCAACTTGCAAGCTTGGGAAAATACCAGACACTGATTTGTACAGAGACGTGGAGCAGTATCCTAATGCAATGAGAGTCCCTGGAGTCATTGTTCTTCAACTTGGTTCCCCTATTTATTATGCCAACTCCAACTACATCAGAGAAAGGATTTTGAGATGGGTTCGTGATGAGCATGCCAAGTACGATTCCGTAGATGGAACCGTCCACCATGTACTGCTGGAGTTGAGTGGAGTTACATCAATCGACATGACAGGGATTGAAACACTCGTCGAAATTCGCAGATTGTTGCAAGCAAACGGAGTTAAGATGGGAATTGTAAACCCAAGAATCGTAGTGATGGAGAAGATGATAGCATCAGAATTCACAAACACGATCGGGAAAGAAAACATCTATTTGTCAGTAGACGATGGAGTGGAAAGGTGCAGAGATTTGGCGTACAACCCACAGAAAACAAATCCAAGTGATGATAACGTGGAATTGAGCGCAGTGGAGCTGCGGGTATAA 1950 46.31 MGSLKSEQHVNFAAPRPFVNRLKSDLKETFYPDDPFRQFRDDRPTHQLRKAVQYFIPILEWLPKYNFNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIAEIIGEVASPEEDPTLYLHLVLTATLITGVMQTALGLLRLGILVDFLSHSTIIGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVFSLRSEWRWQSAVTGVVFLIFLQFTRYLRDRNPKLFWVSAMAPMVTVIVGCLVAYLVHGSQHGILTVGRLNKGINPPSIHSLNFDPKYLPAVVQAGAITGLVALAEGIAIGRSFAIMKNEQVDGNKEMVAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNVVMAVFMALTLLFLAPLFSYTPLVALSAIIMSAMFGLIKYEEIYHLFKVDKFDFCICMAAFLGVALLSMDVGLMLSVGLALLRALLYMARPATCKLGKIPDTDLYRDVEQYPNAMRVPGVIVLQLGSPIYYANSNYIRERILRWVRDEHAKYDSVDGTVHHVLLELSGVTSIDMTGIETLVEIRRLLQANGVKMGIVNPRIVVMEKMIASEFTNTIGKENIYLSVDDGVERCRDLAYNPQKTNPSDDNVELSAVELRV 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9837186 9840422 - Cp4.1LG04g09790.1 Cpe04g01145 468707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01145 649 Gene3D STAS domain 481 626 IPR036513 -
Cpe04g01145 649 Pfam Sulfate permease family 70 451 IPR011547 GO:0016021
Cpe04g01145 649 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271|GO:0008272
Cpe04g01145 649 CDD STAS_SulP_like_sulfate_transporter 502 616 - -
Cpe04g01145 649 TIGRFAM sulP: sulfate permease 57 618 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe04g01145 649 Pfam STAS domain 502 618 IPR002645 -
Cpe04g01145 649 ProSiteProfiles STAS domain profile. 501 623 IPR002645 -
Cpe04g01145 649 PANTHER SULFATE TRANSPORTER 3.5-RELATED 5 625 IPR030316 GO:1902358
Cpe04g01145 649 PANTHER SULFATE TRANSPORTER 5 625 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe04g01145 649 SUPERFAMILY SpoIIaa-like 503 624 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01145 Cpe-Chr4:9837186 Cpe18g00445 Cpe-Chr18:5470892 0 dispersed
Cpe12g00701 Cpe-Chr12:6618880 Cpe04g01145 Cpe-Chr4:9837186 0 wgd
Cpe17g00570 Cpe-Chr17:4661197 Cpe04g01145 Cpe-Chr4:9837186 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01145 K17471 - csv:116402148 1042.72