Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01150 ATGGCTGCAGTTTTCCGTTCTAGAAGCCGCATCCCTGTTTTCTTCATTTTACTTCACCTTTTTCTTCTTCTTCATTCAGTTCAATCGGAGCCGGCCGCCGACAAGGAAGCACTTCTCGATTTCTTGAATCAAATCCCCCATGAGAATCGCCTTCAATGGAATGCGTCGGCCTCTGCTTGTACTTGGGTTGGAGTTAGCTGTGATGTCAATCAGTCGTTTGTTTTTGCTCTCCGGTTGCCGGGTGTTGGACTTGTCGGCCCCATTCCGGCGAATACTCTGGGCCGCTTGAATAGGCTTAGAGTTCTGAGTCTCCGGTCTAATAAAATCTCTGGGGAGTTGCCGGCGGATTTTTCGAATTTGACATTTCTTCGGAGTCTTTATCTTCAGGATAACGAGCTTTCTGGTGAACTACCGGCGAGCGTGACTCAGTTGACTCGGTTGAATCGTCTGGATCTCTCGTCCAACAATTTCACTGGTTCGATTCCATTTTCGATCAATAACTTGACCCATTTGAGCGGGCTTTTTCTGGAGAATAATGGGTTTACGGGCTCTTTGCCGAGTATTCCTGCGACTAATTTAACGAGCTTCAATGTCTCGAATAACCAGCTCAATGGATCCATTCCCGAAACCCTTTCGAAATTCTCTGCTGCCTCTTTCGCTGGGAATTTAGCGCTCTGCGGTGGTCCATTGCCGTCATGCAACCCGTTTTTTCCCTCCCCTGCTCCGTCGCCGACGTCCGCCGTGAAACCCCCAGAAGTTCCCGTCGAGAAGAAGTCGAAAAAGCTCTCCATCGCTGCCATTGTCGGAATAGTCGTCGGCGCTGCTTTCGTTGCGTTTCTGTTGCTGCTTTTACTCATTTTTTGCCTCCGGAAGCGCCAGAGTCGGCAGCCGGCGAAGCCATCGAGTACGGTGGTTACTGCTCGATCTGTGCCAGCGGAGGCCGGCACATCGTCTTCCAAAGACGACATCACCGGCGGGTCGGTGGAAGCGGAGAAAAACAAATTAGTGTTCTTCGAAGGTGGGGTTTACAGTTTCGATTTGGAGGATTTATTGAGGGCTTCAGCGGAGGTTTTGGGAAAAGGAAGTGTCGGAACGTCGTACAAGGCGGTGCTGGAAGAAGGAACCACCGTCGTCGTCAAGAGATTGAAAGATGTCGTAATGACGAAGCAGGAATTCGAAACGCAAATAGAAGCTCTGGGAAATGTCAAACATGAAAATGTGGTTCCTCTCAGAGCTTTCTACTTTTCCAGAGACGAGAAATTACTTGTTTCCGATTACATGGCCGCCGGCAGCCTTTCCGCTTCACTTCACGGAAGCAGAGGATCCGGCCGTACGCCGCTTAACTGGGACAACCGGATGAAAATCGCGTTACACGCAGCGAGAGGACTGGCTCATCTTCACGTGTCGGGAAAACTCGTCCACGGCAACGTCAAATCGTCGAACATCCTCCTCCACCCCACTTACGACGCCGCCGTTTCCGACTACGGCCTCAACCCTCTCTTCGGCGCTACTACGCCGCCGAACCGTATTGCCGGCTACCGCGCACCGGAGGTTGTCGAAACTCGAAAGGTCACCTTGAAGTCCGACGTGTACAGTTTTGGCGTCTTGCTGTTGGAGCTTTTGACCGGAAAATCCCCAATTCAGGCGTCGTTGGGCGAAGAAGGGATTGATCTTCCCCGGTGGGTCCAATCAGTAGTCCGAGAGGAATGGACAGCGGAGGTTTTTGATGTGGAATTGATGAGGTACCACAATATCGAAGAGGAAATGGTTCAGTTGTTACAAATTGCGATGGCTTGTGTCGCCACAGTGCCGGACCAGCGGCCGTCAATGCAGGAAGTGGTTCGAATGATCGAGGACTTGAACCGTGTAGAGACCGATGACGGCTTACGACCATCATCCGATGACCCGTCAAAAGGATCGGAAGGGCACACGCCGCCGCAGGAGTCCAGAGCCACCCCTCCCGGAATCAGCGGAGCAGTGTAG 1983 51.99 MAAVFRSRSRIPVFFILLHLFLLLHSVQSEPAADKEALLDFLNQIPHENRLQWNASASACTWVGVSCDVNQSFVFALRLPGVGLVGPIPANTLGRLNRLRVLSLRSNKISGELPADFSNLTFLRSLYLQDNELSGELPASVTQLTRLNRLDLSSNNFTGSIPFSINNLTHLSGLFLENNGFTGSLPSIPATNLTSFNVSNNQLNGSIPETLSKFSAASFAGNLALCGGPLPSCNPFFPSPAPSPTSAVKPPEVPVEKKSKKLSIAAIVGIVVGAAFVAFLLLLLLIFCLRKRQSRQPAKPSSTVVTARSVPAEAGTSSSKDDITGGSVEAEKNKLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVMTKQEFETQIEALGNVKHENVVPLRAFYFSRDEKLLVSDYMAAGSLSASLHGSRGSGRTPLNWDNRMKIALHAARGLAHLHVSGKLVHGNVKSSNILLHPTYDAAVSDYGLNPLFGATTPPNRIAGYRAPEVVETRKVTLKSDVYSFGVLLLELLTGKSPIQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVATVPDQRPSMQEVVRMIEDLNRVETDDGLRPSSDDPSKGSEGHTPPQESRATPPGISGAV 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9863766 9866897 + Cp4.1LG04g09840.1 Cpe04g01150 468712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01150 660 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Cpe04g01150 660 SUPERFAMILY Protein kinase-like (PK-like) 356 617 IPR011009 -
Cpe04g01150 660 Gene3D Phosphorylase Kinase; domain 1 320 426 - -
Cpe04g01150 660 SUPERFAMILY L domain-like 36 214 - -
Cpe04g01150 660 MobiDBLite consensus disorder prediction 621 637 - -
Cpe04g01150 660 PANTHER OS05G0480400 PROTEIN 17 638 - -
Cpe04g01150 660 Pfam Leucine Rich Repeat 98 120 IPR001611 GO:0005515
Cpe04g01150 660 MobiDBLite consensus disorder prediction 621 660 - -
Cpe04g01150 660 Gene3D Ribonuclease Inhibitor 189 236 IPR032675 -
Cpe04g01150 660 CDD STKc_IRAK 358 620 - -
Cpe04g01150 660 ProSiteProfiles Protein kinase domain profile. 352 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01150 660 PANTHER OS05G0588300 PROTEIN 17 638 - -
Cpe04g01150 660 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Cpe04g01150 660 MobiDBLite consensus disorder prediction 299 325 - -
Cpe04g01150 660 Gene3D Transferase(Phosphotransferase) domain 1 427 633 - -
Cpe04g01150 660 MobiDBLite consensus disorder prediction 299 324 - -
Cpe04g01150 660 Pfam Protein kinase domain 355 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01150 Cpe11g01095 CCT
Cpe04g01150 Cpe07g00990 CCT
Cpe04g01150 Cpe18g00458 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00813 Cpe-Chr2:5206484 Cpe04g01150 Cpe-Chr4:9863766 3.27E-12 dispersed
Cpe03g00034 Cpe-Chr3:178075 Cpe04g01150 Cpe-Chr4:9863766 8.90E-22 dispersed
Cpe04g01150 Cpe-Chr4:9863766 Cpe10g01009 Cpe-Chr10:5791475 0 dispersed
Cpe09g00316 Cpe-Chr9:1877589 Cpe04g01150 Cpe-Chr4:9863766 2.47E-21 dispersed
Cpe10g00446 Cpe-Chr10:2605039 Cpe04g01150 Cpe-Chr4:9863766 1.53E-110 dispersed
Cpe13g00913 Cpe-Chr13:7774455 Cpe04g01150 Cpe-Chr4:9863766 1.08E-91 transposed
Cpe11g01095 Cpe-Chr11:9123791 Cpe04g01150 Cpe-Chr4:9863766 0 wgd
Cpe18g00458 Cpe-Chr18:5556028 Cpe04g01150 Cpe-Chr4:9863766 0 wgd
Cpe04g01150 Cpe-Chr4:9863766 Cpe07g01079 Cpe-Chr7:9550744 6.75E-121 wgd
Cpe04g01150 Cpe-Chr4:9863766 Cpe07g00990 Cpe-Chr7:9019304 6.46E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62364 PF00069 Pkinase 6.70E-36 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01150 - - csv:101209965 1052.35