Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01172 ATGAAATTGATCGAGGGTCGAAAAGGGAATTCACAGAAAATTTGGGCAATGGATGAAAAAGCACCAAAAGATTTATTAGGGCTCATGATTCAAGCTTCCAACTCATCATCATCATCATCATCATCTTCTTCTTCATTACACACTAATATTTCCGTCCACGACATCGTTGAAGAGTGCAAAACCTTCTTCTTTGCTGGCAAACAGACCACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTAGCAATGCATCCACAGTGGCAAATTCAGGCACGTGACGAGGTTCTTAGCGTGTGCGGTCCACGTGCTCTCCCCTCCAGAGATGACCTTTCTAAGTTCAAGATCCTGAGCATGATACTGAACGAGTCCTTACGATTGTACCCTCCGACGGTGGCTACGATTCGACGTGCAAAGACAGTTGTCGAGCTAAGAGGGCGGATGATCCCACGTGGGACAGAGTTCTTAATCCCAATTCTAGCGGTTCATCATGATCAAAATATTTGGGGGAACGATGCGAGCGAGTTCAATCCAGGGCGATTCTCAGAAGGTGTGGGTCACGCTGGAAACCATCCAGCCGGGTTCATTCCATTTGGACATGGTCTTCGTGCTTGCATTGGCAAGAACTTGGCTCTTCTGCAAGCAAAGTTGGCAATAGCAATCATAGTTCAAAGATTCTCATTTCGATTGGCTCCTTCTTATCAGCATGCACCAACGGTGTTGATGCTTTTGTATCCGCAATACGGAGCTCCGATTGTTTTTCGAAAGATAGAGACCCCAAGGGACTAA 786 46.31 MKLIEGRKGNSQKIWAMDEKAPKDLLGLMIQASNSSSSSSSSSSSLHTNISVHDIVEECKTFFFAGKQTTSNLLTWTTVLLAMHPQWQIQARDEVLSVCGPRALPSRDDLSKFKILSMILNESLRLYPPTVATIRRAKTVVELRGRMIPRGTEFLIPILAVHHDQNIWGNDASEFNPGRFSEGVGHAGNHPAGFIPFGHGLRACIGKNLALLQAKLAIAIIVQRFSFRLAPSYQHAPTVLMLLYPQYGAPIVFRKIETPRD 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9983851 9986183 - Cp4.1LG04g09580.1 Cpe04g01172 468734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01172 261 PRINTS E-class P450 group I signature 54 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 PRINTS E-class P450 group I signature 204 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 PRINTS E-class P450 group I signature 74 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 PRINTS E-class P450 group I signature 194 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 251 - -
Cpe04g01172 261 SUPERFAMILY Cytochrome P450 14 254 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 Gene3D Cytochrome P450 1 256 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 197 206 IPR017972 GO:0005506|GO:0016705
Cpe04g01172 261 PANTHER CYTOCHROMEA2 1 251 - -
Cpe04g01172 261 PRINTS P450 superfamily signature 118 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 PRINTS P450 superfamily signature 65 82 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 PRINTS P450 superfamily signature 204 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 PRINTS P450 superfamily signature 195 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01172 261 Pfam Cytochrome P450 12 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01172 Cpe-Chr4:9983851 Cpe07g01083 Cpe-Chr7:9593696 5.79E-129 dispersed
Cpe11g01088 Cpe-Chr11:9067283 Cpe04g01172 Cpe-Chr4:9983851 2.84E-124 wgd
Cpe18g00469 Cpe-Chr18:5635774 Cpe04g01172 Cpe-Chr4:9983851 2.67E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01172 K15639 - csv:101213466 405.601