Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01281 ATGGGCATGGAACTGAGGAAGGAAAAGCTTGTTAGGTTTTATTCTGATCACAAAAAACATAAGAAATCTGCCATTGGGACCAACAATGAAGCAGGGCAACTTGAGAAGTCATCATCGAAATACTATATTCCGTCGTCGACATTCTTAATACCTGACAACGGATTAGGGGCAAGCAAAAGTAAATCTGCTGAAACTTTTAGAACTGAGAAGTCCAAAGTGTTTCCAGAGGACCATGAACCATGGAGCAGAAGAATACTAGACCCTGGCAGAAAAATTGTTTTGAAATGGAACCGGGTGTTCATTTGCTCATGTTTATTGGCACTCTTTGTTGACCCGCTGTACCTTTACTTGCCATCTTTGGCTGGGAATGGGAAATCTTCATGTGTGAGGACAGACTGGAAATTGCGAATTGTTGTGACCTGTTTCCGGACTGTTGCAGATTTTTTCTATCTTCTGCACATGATTATCAAGTTCAGAACAGCTTATGTTGCTCCTAGCTCTCGAGTTTTTGGGAGAGGTGAGCTTGTGATGGATTCGAAGATAATAGCAAAGAGGTATCTTAGATCTGACTTTTTTGTCGATCTAATTGCCACGTTGCCTCTCCCTCAGATTGTCATCTGGTTTATCATACCCGCAACAAGAAGTCGTCTAACTGATCATAAAAACAATGCGCTTGCGCTTATTGTTCTGCTTCAATATATTCCAAGATTGTATTTGATTTTCCCTCTTAGTTCAGAGATCATCAAAGCAAATGGAGTTGTTACAAAAACTGCTTGGGCAGGAGCTGCTTATAATCTTCTACTCTATATGTTGGCTAGCCATGTTCTAGGTGCTACATGGTATTTGCTGTCAGTTGATAGATATACATCATGCTGGAAATCATTTTGTAGGAAGAAGGAATATAATCCACTAGAATGCAATCCAACTTTTTTTGATTGCGATACACTAAACCTTATTAACCGCAATACATGGGCAAATAGTACACTTGTTTTCGACAAATGTGGCCCTAGTGGAATTTTCAAGTATGGCATTTTTGGGAATGCAATGTCAAAGAATGTTGTCTCTTCAAGCTTTGTTGAAAAGTATTTCTATTGTTTGTGGTGGGGCTTGCAAAACCTGAGTTCATATGGACAGAACTTGGAAACAACCACTTTCATTGGTGAGACACTGTTCGCTGTGCTTATAGCCATCTTAGGCCTTGTATTATTTGCCCATCTGATTGGGAATATGCAGACGTATCTGCAATCCCTCACTGTGAGGCTTGAAGAATGGAGATTAAAGCGAAGAGACACTGAAGAGTGGATGAGACATCGTCAACTCCCTGAAGACTTGAAGCGACGTGTTCGACGTTTTGTACAATATAAGTGGGTGGCAACTCGAGGAGTTAATGAAGAAGCCATCTTACAGAGCTTGCCGGCTGATCTTCGACGTGATATTCAGTGCCACCTCTGTCTAGATCTTGTCCGACGAGTCCCTTTCTTCTCACAGATGGATGATCAGCTACTAGATGCAATATGTGAACGCCTGATATCGTCCTTGAGCACTGAGGGTACCTATATTGTACGAGAGGGTGACCCAGTAACCGAGATGCTGTTCGTTATCCGAGGCAGATTGGAGAGTTCTACTACGAATGGAGGTCGCTCTGGTTTCTTCAACTCCATAACGTTGCGTCCTGGAGACTTTTGTGGGGAGGAACTACTTTCTTGGGCGTTGCACCCAAAATCCACCACCAACTTGCCCTCCTCAACTAGAACAGTCAGAGCGCTCAATGAAGTTGAAGCTTTTGCACTCCGTGCTGAAGATCTTAAATTTGTAGCCAACCAATTTAGACGTCTGCACAGTAAAAAGTTGCAGCACACATTCCGCTTTTACTCTCATCATTGGAGAACATGGGCAGCTTGCTTTATTCAAGCTGCTTGGCGTCGCCATAAGAAAAGGATGATGGCAAAAGATCTCTTAATGAGGGAGTCGTTTATATTATCTGAAGAAGTGGCTAGTGAAACTGGCCAAGGAGGAGAGGAACAATTTTGTGTTGTTTCAAATCCTTCTCAGACAAAAATGAATCTGGATGTTACCTTACTGGCTTCAAGGTTTGCTGCAAACGCAAGGAGAGGCGCTCAGAAAATGAAAGATGACATGCCAAAGCTGCAGAAGCCTGATGAACCCGACTTTTCCATTGAGCCAGATAGATAA 2193 42.45 MGMELRKEKLVRFYSDHKKHKKSAIGTNNEAGQLEKSSSKYYIPSSTFLIPDNGLGASKSKSAETFRTEKSKVFPEDHEPWSRRILDPGRKIVLKWNRVFICSCLLALFVDPLYLYLPSLAGNGKSSCVRTDWKLRIVVTCFRTVADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDSKIIAKRYLRSDFFVDLIATLPLPQIVIWFIIPATRSRLTDHKNNALALIVLLQYIPRLYLIFPLSSEIIKANGVVTKTAWAGAAYNLLLYMLASHVLGATWYLLSVDRYTSCWKSFCRKKEYNPLECNPTFFDCDTLNLINRNTWANSTLVFDKCGPSGIFKYGIFGNAMSKNVVSSSFVEKYFYCLWWGLQNLSSYGQNLETTTFIGETLFAVLIAILGLVLFAHLIGNMQTYLQSLTVRLEEWRLKRRDTEEWMRHRQLPEDLKRRVRRFVQYKWVATRGVNEEAILQSLPADLRRDIQCHLCLDLVRRVPFFSQMDDQLLDAICERLISSLSTEGTYIVREGDPVTEMLFVIRGRLESSTTNGGRSGFFNSITLRPGDFCGEELLSWALHPKSTTNLPSSTRTVRALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKKRMMAKDLLMRESFILSEEVASETGQGGEEQFCVVSNPSQTKMNLDVTLLASRFAANARRGAQKMKDDMPKLQKPDEPDFSIEPDR 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10588515 10596247 + Cp4.1LG04g12790.1 Cpe04g01281 468843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01281 730 Gene3D - 124 418 - -
Cpe04g01281 730 Pfam Cyclic nucleotide-binding domain 516 604 IPR000595 -
Cpe04g01281 730 SMART cnmp_10 493 624 IPR000595 -
Cpe04g01281 730 PRINTS EAG/ELK/ERG potassium channel family signature 154 163 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe04g01281 730 PRINTS EAG/ELK/ERG potassium channel family signature 271 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe04g01281 730 PRINTS EAG/ELK/ERG potassium channel family signature 362 379 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe04g01281 730 PRINTS EAG/ELK/ERG potassium channel family signature 388 399 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe04g01281 730 PRINTS EAG/ELK/ERG potassium channel family signature 406 415 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe04g01281 730 PRINTS EAG/ELK/ERG potassium channel family signature 456 463 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe04g01281 730 Pfam Ion transport protein 96 420 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe04g01281 730 MobiDBLite consensus disorder prediction 704 730 - -
Cpe04g01281 730 ProSiteProfiles cAMP/cGMP binding motif profile. 493 577 IPR000595 -
Cpe04g01281 730 SUPERFAMILY Voltage-gated potassium channels 91 415 - -
Cpe04g01281 730 SUPERFAMILY cAMP-binding domain-like 423 615 IPR018490 -
Cpe04g01281 730 Gene3D Helix hairpin bin 421 484 - -
Cpe04g01281 730 Gene3D Jelly Rolls 491 611 IPR014710 -
Cpe04g01281 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 52 727 - -
Cpe04g01281 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 52 727 - -
Cpe04g01281 730 CDD CAP_ED 493 624 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00396 Cpe-Chr2:2201234 Cpe04g01281 Cpe-Chr4:10588515 0 dispersed
Cpe03g00554 Cpe-Chr3:3258098 Cpe04g01281 Cpe-Chr4:10588515 4.59E-144 dispersed
Cpe04g01281 Cpe-Chr4:10588515 Cpe16g00526 Cpe-Chr16:6198876 0 dispersed
Cpe18g00596 Cpe-Chr18:6342951 Cpe04g01281 Cpe-Chr4:10588515 0 wgd
Cpe04g01281 Cpe-Chr4:10588515 Cpe07g00711 Cpe-Chr7:5979654 3.16E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01281 K05391 - csv:101218643 1366.67