Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01294 ATGCAGAGGCAGACAAGATATATGGAGAGGACGAACTCCATGAGAGAAAAAAGGGGCTTGGAGGGTGGAGATGATGAGCTGCCGGAGCGAAAGCGACCAGCTCTAGCTAGTGTGATTGTAGAAGCCCTGAAAGTGGATAGTTTACAAAAGCTCTTCTCATCAATGGAACCAATACTCCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAATTACTGGAAGGTCTTCTCCTAAAAGGATTGAAGGCCCTGATGGAAGAAACTTGCAACTGCATTTTAGGTCTAGATTGTCTCTTCCCCTGTTCACTGGAGGGAAAGTGGAAGGTGAACAGGGTGCAGCAATCCATGTTGTTCTGCTTGATGCTAACACAGGTCATGTAGTAACATCTGGACCTGAATCCTTGTCAAAATTGGACATTGTGGTACTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACGGAGGAAGAATTCGAAGGTCATGTGGTAAAAGAGCGTGAAGGAAAGAGGCCTCTATTGACCGGTGACCTGCAGGTTTCCCTCAAGGAAGGTGTTGGAACACTAGGGGATTTGACCTTCACTGATAACTCAAGTTGGATTAGGAGCAGAAAGTTCAGACTTGGGTTAAAGGTGGCTTCAGGATTTTGTGAAGGTGTTCGCATTCGTGAAGCAAAAACTGAAGCTTTTACGGTTAAAGATCATCGAGGAGAATTGTATAAAAAACATTACCCACCTGCATTAAACGATGATGTGTGGAGATTAGAGAAGATTGGAAAGGATGGTTCCTTTCACAAACGACTAAATAAAAGTGGAATAGTCACCGTCGAAGACTTTCTCCGACTGGTAGTTCGAGATTCTCAAGGACTACGAAGTATCCTTGGAAGTGGTATGTCTAATAAGATGTGGGAGGCTCTCTTAGAACATGCTAAGACCTGTGTCCTGAGCGGGAAGTTGTATATTTATTATCCAGAGGAATCCAGAAATGTTGGTGTTGTTTTTAACAATATCTATGAGCTCAACGGCCTGATTGCAGAGGAACAATACTTTCCTGCTGATTCTCTGTCTGAGAGCCAGAAGGTTTATGTAGATACACTAGTGAACAAAGCATATGAAAATTGGAATCAAGTTGTAGAGTACGATGGGAAGTCACTTTTGAGCTCTAAGAAGCCTAAGAAGTCCAATGCATCCCGAAATGACTTTCAAGGAGGTCATCTTGATCTTTCTAATACCCATGTGTCAGTGCCCCGCATGCCAGTATCAGTTCAGCCTCAGCAGCCTATCGTGGATTCAGGACTCTCAGTTGCAGGGTATAATGATAATACAGCCACAAGATATTCAACCCAACCTCAGTTTGTGAATTCAACTTCTCGACCCCAATTTGACAACTCCTCATTTACTCCAAATGAGTTGCTCGGCAATTCTAACCACGTTCATGTCACAAGAAATGACCCTAGTACTTTTGGTTTGGCTCTTGGTCCTCCGCAAGCATCGTCATCTTCAGGTTTTCAGCCGCTTGGTTCTTCTATTCAGGAATCTAGTATGAATCCATTTGACTGGTCAAACAATAGAGACAAGGTAGTGGATGACTTCTTTTCAGAGGACGAGATTCGTATGAGAAGTCACGAGATGCTGGAAAATGAAGAGATGCAACACTTGTTGCGAATGTTTAGCATGGGTGGCCATTCATCTGTTAACGTCCATGATGAGAGTTTTTCATTCCCATCATTCATGCCTTCACCAATGCCAAATTTTGATGATCGAAACCGTCCTGGAAAAGCTGTGGTAGGTTGGTTGAAGATCAAAGCTGCAATGAGGTGGGGCTTCTTCATCAGGAAGAAAGCAGCCGAGAGACGTGCACAGATTGTCGAGTTGGATGAGGAATAG 1911 43.64 MQRQTRYMERTNSMREKRGLEGGDDELPERKRPALASVIVEALKVDSLQKLFSSMEPILRRVVSEEVERALAKIGPARITGRSSPKRIEGPDGRNLQLHFRSRLSLPLFTGGKVEGEQGAAIHVVLLDANTGHVVTSGPESLSKLDIVVLEGDFNNEDDEDWTEEEFEGHVVKEREGKRPLLTGDLQVSLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALNDDVWRLEKIGKDGSFHKRLNKSGIVTVEDFLRLVVRDSQGLRSILGSGMSNKMWEALLEHAKTCVLSGKLYIYYPEESRNVGVVFNNIYELNGLIAEEQYFPADSLSESQKVYVDTLVNKAYENWNQVVEYDGKSLLSSKKPKKSNASRNDFQGGHLDLSNTHVSVPRMPVSVQPQQPIVDSGLSVAGYNDNTATRYSTQPQFVNSTSRPQFDNSSFTPNELLGNSNHVHVTRNDPSTFGLALGPPQASSSSGFQPLGSSIQESSMNPFDWSNNRDKVVDDFFSEDEIRMRSHEMLENEEMQHLLRMFSMGGHSSVNVHDESFSFPSFMPSPMPNFDDRNRPGKAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELDEE 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10669450 10676546 + Cp4.1LG04g12960.1 Cpe04g01294 468856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01294 636 Pfam Calmodulin binding protein central domain 255 321 IPR046830 -
Cpe04g01294 636 MobiDBLite consensus disorder prediction 393 417 - -
Cpe04g01294 636 PANTHER OS02G0177800 PROTEIN 7 634 IPR012416 GO:0005516
Cpe04g01294 636 PANTHER CALMODULIN-BINDING PROTEIN 60 B 7 634 - -
Cpe04g01294 636 MobiDBLite consensus disorder prediction 9 29 - -
Cpe04g01294 636 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Cpe04g01294 636 Coils Coil 630 636 - -
Cpe04g01294 636 MobiDBLite consensus disorder prediction 1 29 - -
Cpe04g01294 636 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01294 Cpe18g00610 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01294 Cpe-Chr4:10669450 Cpe04g01537 Cpe-Chr4:12066980 1.40E-71 dispersed
Cpe18g00610 Cpe-Chr18:6407433 Cpe04g01294 Cpe-Chr4:10669450 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01294 - - cmo:103494282 1138.64