Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g01319 | ATGTTTGAAAGCAAATTTCTGAAGTTCTTGGGGTTCATGTGGAATCCCTTGTCTTGGGTTATGGAAGCCGCAGCTTTGATGGCTATTGCTTTGGCTAATGGTGATGGACGGCCTCCAGATTGGGAAGACTTTGTGGGTATTATATGTTTGCTGGTCATCAACTCCACTATCAGTTTCATTGAAGAAAATAACGCTGGGAATGCTGCTGCTGCTCTCATGGCTGGCCTCGCCCCTAAAACTAAGTTGGGGGATATCATCCCAGCTGATGCTCGTCTTCTGGAGGGCGATCCTTTGAAAGTTGATCAATCTGCATTGACTGGAGAATCACTTCCTGTAACCAAGAATCCAGGGGATGGAATCTTCTCTGGTTCAACTTGTAAACAAGGAGAAATCGAAGCTGTTGTCATTGCCACTGGTGTTCATACCTTCTTTGGAAAAGCAGCACATCTTGTAGACAGCACTCACCAAGTTGGCCATTTCCAAAAGGTGCTCACAGCAATTGGGAATTTCTGTATTTGTTCCATTGCTTTAGGAATGCTGGTTGAGATCATTGTCATGTACCCAATTCAACACCGGAGTTACCGCGACGGTATCGACAATCTGCTCGTTCTCTTGATCGGAGGAATACCGATTGCCATGCCAACAGTGTTGTCAGTGACAATGGCTATTGGATCTCATAAGCTGTCCCAACAAGGCGCTATCACTAAGCGTATGACTGCTATTGAAGAGATGGCTGATCTTGACGCTTTGCAACTGCAAGGCCGATGTTAA | 771 | 45.65 | MFESKFLKFLGFMWNPLSWVMEAAALMAIALANGDGRPPDWEDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDGIFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTHQVGHFQKVLTAIGNFCICSIALGMLVEIIVMYPIQHRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMADLDALQLQGRC | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 10842080 | 10843960 | - | Cp4.1LG04g13220.1 | Cpe04g01319 | 468881 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g01319 | 256 | SUPERFAMILY | Calcium ATPase, transduction domain A | 81 | 151 | IPR008250 | - | |
Cpe04g01319 | 256 | PANTHER | PLASMA MEMBRANE ATPASE | 3 | 81 | - | - | |
Cpe04g01319 | 256 | PANTHER | PLASMA MEMBRANE ATPASE | 81 | 250 | - | - | |
Cpe04g01319 | 256 | Pfam | E1-E2 ATPase | 81 | 230 | - | - | |
Cpe04g01319 | 256 | Gene3D | - | 12 | 82 | - | - | |
Cpe04g01319 | 256 | Gene3D | - | 139 | 247 | - | - | |
Cpe04g01319 | 256 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 3 | 81 | - | - | |
Cpe04g01319 | 256 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 81 | 250 | - | - | |
Cpe04g01319 | 256 | Gene3D | - | 83 | 138 | - | - | |
Cpe04g01319 | 256 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 4 | 245 | IPR023298 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g01319 | Cpe-Chr4:10842080 | Cpe18g00548 | Cpe-Chr18:6048594 | 2.36E-145 | dispersed | |
Cpe11g00633 | Cpe-Chr11:4054155 | Cpe04g01319 | Cpe-Chr4:10842080 | 1.52E-146 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g01319 | K01535 | - | tcc:18589272 | 439.113 |