Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01319 ATGTTTGAAAGCAAATTTCTGAAGTTCTTGGGGTTCATGTGGAATCCCTTGTCTTGGGTTATGGAAGCCGCAGCTTTGATGGCTATTGCTTTGGCTAATGGTGATGGACGGCCTCCAGATTGGGAAGACTTTGTGGGTATTATATGTTTGCTGGTCATCAACTCCACTATCAGTTTCATTGAAGAAAATAACGCTGGGAATGCTGCTGCTGCTCTCATGGCTGGCCTCGCCCCTAAAACTAAGTTGGGGGATATCATCCCAGCTGATGCTCGTCTTCTGGAGGGCGATCCTTTGAAAGTTGATCAATCTGCATTGACTGGAGAATCACTTCCTGTAACCAAGAATCCAGGGGATGGAATCTTCTCTGGTTCAACTTGTAAACAAGGAGAAATCGAAGCTGTTGTCATTGCCACTGGTGTTCATACCTTCTTTGGAAAAGCAGCACATCTTGTAGACAGCACTCACCAAGTTGGCCATTTCCAAAAGGTGCTCACAGCAATTGGGAATTTCTGTATTTGTTCCATTGCTTTAGGAATGCTGGTTGAGATCATTGTCATGTACCCAATTCAACACCGGAGTTACCGCGACGGTATCGACAATCTGCTCGTTCTCTTGATCGGAGGAATACCGATTGCCATGCCAACAGTGTTGTCAGTGACAATGGCTATTGGATCTCATAAGCTGTCCCAACAAGGCGCTATCACTAAGCGTATGACTGCTATTGAAGAGATGGCTGATCTTGACGCTTTGCAACTGCAAGGCCGATGTTAA 771 45.65 MFESKFLKFLGFMWNPLSWVMEAAALMAIALANGDGRPPDWEDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDGIFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTHQVGHFQKVLTAIGNFCICSIALGMLVEIIVMYPIQHRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMADLDALQLQGRC 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10842080 10843960 - Cp4.1LG04g13220.1 Cpe04g01319 468881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01319 256 SUPERFAMILY Calcium ATPase, transduction domain A 81 151 IPR008250 -
Cpe04g01319 256 PANTHER PLASMA MEMBRANE ATPASE 3 81 - -
Cpe04g01319 256 PANTHER PLASMA MEMBRANE ATPASE 81 250 - -
Cpe04g01319 256 Pfam E1-E2 ATPase 81 230 - -
Cpe04g01319 256 Gene3D - 12 82 - -
Cpe04g01319 256 Gene3D - 139 247 - -
Cpe04g01319 256 PANTHER CALCIUM-TRANSPORTING ATPASE 3 81 - -
Cpe04g01319 256 PANTHER CALCIUM-TRANSPORTING ATPASE 81 250 - -
Cpe04g01319 256 Gene3D - 83 138 - -
Cpe04g01319 256 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 245 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01319 Cpe-Chr4:10842080 Cpe18g00548 Cpe-Chr18:6048594 2.36E-145 dispersed
Cpe11g00633 Cpe-Chr11:4054155 Cpe04g01319 Cpe-Chr4:10842080 1.52E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01319 K01535 - tcc:18589272 439.113