Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01376 ATGGGGAGTGGAACTCTCGTAGATGGTGTTCGTCGCTGGTTTCAACGTCGCATTACTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCTTCCTCTTCTTCTAATTTAGGACGTAATTCTGATTCTGATTCTAATCTCAATTACCCATATAATAATAAGCTCGATTATGTGGATAATGGCGAAAATGGAAACCAATTGTTGAGTAGCGATTTACGCGCCCAATCGACCATTCTTCCCCCCAAACGCAAACGTTTACGGAAGCAACCCCATCCCGGAGGAGAAGGCATTCTTGAGCGATTATCTGAGGAGGAGGACGATGATGTCGACGACCTTGATTACTCTGCCTTGAAGCTCATCAAAGTTCCTAAGCGGACCAATCATTTCAGAGCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCCGCTATAATGGATTCCCACAAGAAGGGTGGATTGGAAACAGAATTTTTCACAGAGTATGGAGAAGCCAGCAGATATCAGGTTCAAGAAATAATTGGTAAAGGAAGCTACGGGGTTGTCGGTTCTGCCATTGATACACATACTGATGAGAAGGTCGCAATCAAGAAAATTAATGATGTTTTTGAGCACGTTTCTGATGCCACAAGAATATTAAGAGAAATTAAACTCCTACGGCTGCTTCGACATCCAGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGACCTCCACCAAGTCATCAAGGCCAACGATGATCTCACTCCTGAGCACCATCAATTTTTCTTGTACCAGCTTCTTCGTGGTCTGAAATATATACATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAAAACATCTTAGCTAATGCCGACTGCAAACTGAAAATATGTGATTTTGGACTCGCTCGTGTGTCGTTTAATGATGCTCCATCTGCTATTTTCTGGACTGACTATGTTGCGACCCGGTGGTATCGTGCTCCTGAACTTTGTGGCTCTTTTTTCTCGAAATACACTCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCGGAAATGCTCACTGGAAAGCCACTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTGATGACTGATGTGCTTGGCACGCCTTCGGCTGAGTCCATTGCTAGGATTCGAAATGAAAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAGTTCCCCAATGCCGATCCCTTGGCTCTCTGCTTGCTTCAACGCCTGCTTGCATTTGATCCCAAAGACCGTCCTACAGCTGAAGAGGCATTAGCGGATCCTTACTTTCATGGTTTGGCGAACGTGGATCGCGAACCATCAACTCAACCGATTTCAAAACTTGAATTTGAATTTGAGAGAAGAAAGTTGACAAAAGATGATGTTAGAGAATTAATCTATCGAGAGATCTTGGAGTATCATCCTCAGATGCTGCAAGAATATCTCCGCAGTGGAGAACAAACTAGTTTCATGTACCCAAGTGGTGTCGATCGTTTCAAACGCCAGTTTGCACATCTGGAGGAACATTATGGTAAGGGTGAAAGAAGTTCTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGGTTTGTGCACCCAAAGATGAGGCTGCACAGCACGAGGATTTAGAAGGAAGAAATGGTGTATATGTTGCTTCAACTCTTCAGAGTCCCCCAAGGTCGCAGCAAGGTGATGGTTCGGAAAATGCAAACAGTAACGAACAAAATGGACAAAGCAAGCCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATCAGTGCCTCTAAATGTATAGGTGTCAAACCAAAAAAGGAACTAGAGGAGGAACCGATTACGGAGGTTAACGACGAGGCAGTTGATGGGTTGTCTCAGAAGGTTTCGGCCTTGCATACTTGA 1986 44.11 MGSGTLVDGVRRWFQRRITSSSSSSSSSSSSSSNLGRNSDSDSNLNYPYNNKLDYVDNGENGNQLLSSDLRAQSTILPPKRKRLRKQPHPGGEGILERLSEEEDDDVDDLDYSALKLIKVPKRTNHFRAPPPPPPPPPPLPAIMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAIDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALCLLQRLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSSPLQRQHASLPRERVCAPKDEAAQHEDLEGRNGVYVASTLQSPPRSQQGDGSENANSNEQNGQSKPNYSARSLLKSASISASKCIGVKPKKELEEEPITEVNDEAVDGLSQKVSALHT 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11169248 11175288 + Cp4.1LG04g13790.1 Cpe04g01376 468938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01376 661 MobiDBLite consensus disorder prediction 537 562 - -
Cpe04g01376 661 CDD STKc_TDY_MAPK 165 502 - -
Cpe04g01376 661 ProSitePatterns Protein kinases ATP-binding region signature. 172 196 IPR017441 GO:0005524
Cpe04g01376 661 Gene3D Transferase(Phosphotransferase) domain 1 252 480 - -
Cpe04g01376 661 MobiDBLite consensus disorder prediction 17 74 - -
Cpe04g01376 661 Gene3D Phosphorylase Kinase; domain 1 182 503 - -
Cpe04g01376 661 MobiDBLite consensus disorder prediction 583 616 - -
Cpe04g01376 661 MobiDBLite consensus disorder prediction 628 661 - -
Cpe04g01376 661 ProSitePatterns MAP kinase signature. 201 304 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe04g01376 661 ProSiteProfiles Protein kinase domain profile. 166 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01376 661 SUPERFAMILY Protein kinase-like (PK-like) 162 462 IPR011009 -
Cpe04g01376 661 MobiDBLite consensus disorder prediction 17 95 - -
Cpe04g01376 661 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 132 590 - -
Cpe04g01376 661 SMART serkin_6 166 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01376 661 Pfam Protein kinase domain 166 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01376 661 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 132 590 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01376 Cpe09g01119 CCT
Cpe04g01376 Cpe09g01119 ECH
Cpe04g01376 Cpe20g00144 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00034 Cpe-Chr1:232257 Cpe04g01376 Cpe-Chr4:11169248 0 dispersed
Cpe01g00906 Cpe-Chr1:5334482 Cpe04g01376 Cpe-Chr4:11169248 0 dispersed
Cpe04g01376 Cpe-Chr4:11169248 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe18g00681 Cpe-Chr18:6822933 Cpe04g01376 Cpe-Chr4:11169248 0 wgd
Cpe20g00144 Cpe-Chr20:812233 Cpe04g01376 Cpe-Chr4:11169248 0 wgd
Cpe04g01376 Cpe-Chr4:11169248 Cpe09g01119 Cpe-Chr9:9629950 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62375 PF00069 Pkinase 6.60E-68 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01376 - - cpep:111793155 1257.66