Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01387 GCAATAGAGAGTGAAAAAAGAAGAAAAAAACAGACAAAAATGGCAAAGGGAAAACTTGTGTCTGAGAAGATTAAGCTCATTCTTGCCTTGATTGCTTTGCAATTCTGCTATGCAGGATTTCACATTGTGTCAAGAGTTGCTTTGAACATTGGTGTTAGTAAAGTCGTGTATCCGGTGTATCGAAACGCGATCGCTTTAGCTCTGTTGAGTCCTTTTGCTTATTTCCTTGAGAAGAATGAAAGGCCTCCTCTTACTTTTTCTTTGCTGTTTCAGTTCTTTCTTCTAGCTTTATTTGGAATCACTGCCAATCAAGGATTTTACCTCTTGGGGCTAAACTATGCATCTCCAACTTTTGCTTCTGCAATGCAAAACTCTGTTCCTGCTATTACAAGGAGAGATGGGTTGGCAAAGCTTTTGGGAACTATTGGGAGTGTTGGAGGAGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTTTTCACAACTTACTAACTCAAGGAAGTAGCATCTTGGGGATGGATGAACCTACACTTAAAGTGCAGAACTGGAGATGGGGCTGCATATACCTGCTAGGCCACTGCCTATCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTGTGTTGAAAAAATATCCAGCAAAGCTAACAATAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATTGCTGGCTTTGTGGAAACAGACTATCATGATCCTGTCTTTGTTGCTGTCTTCCAGCCTCTCCAAACTTTCCTAGTAGCCATCATGGCGTTTCTCATCCTCGGCGATCGGTTATTCTCCGGCGGGGTTATTGGAGCTGTTCTTATAACATTTGGTCTCTACTTAGTTTTGTGGGGAAAAAGTAAAGAAAAGGCATTGGAAGAAGAAGAAGACAAGTGTTTGAAACAGCCACTTTTGGAAGACCAAAAAGGGGACAAAGAAGACAAC 960 41.98 AIESEKRRKKQTKMAKGKLVSEKIKLILALIALQFCYAGFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERPPLTFSLLFQFFLLALFGITANQGFYLLGLNYASPTFASAMQNSVPAITRRDGLAKLLGTIGSVGGATVITLYRGPPLFHNLLTQGSSILGMDEPTLKVQNWRWGCIYLLGHCLSWAGWMVFQASVLKKYPAKLTITSYTCFFGLIQFLVIAGFVETDYHDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGVIGAVLITFGLYLVLWGKSKEKALEEEEDKCLKQPLLEDQKGDKEDN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11222436 11225120 - Cp4.1LG04g13900.1 Cpe04g01387 468949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01387 320 Pfam EamA-like transporter family 27 130 IPR000620 GO:0016020|GO:0016021
Cpe04g01387 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 153 - -
Cpe04g01387 320 PANTHER WAT1-RELATED PROTEIN 22 240 IPR030184 GO:0016021|GO:0022857
Cpe04g01387 320 PANTHER WAT1-RELATED PROTEIN 242 297 - -
Cpe04g01387 320 PANTHER WAT1-RELATED PROTEIN 22 240 - -
Cpe04g01387 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 293 - -
Cpe04g01387 320 PANTHER WAT1-RELATED PROTEIN 242 297 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01387 Cpe-Chr4:11222436 Cpe11g00228 Cpe-Chr11:1217523 1.60E-93 dispersed
Cpe04g01387 Cpe-Chr4:11222436 Cpe07g00390 Cpe-Chr7:2529138 9.01E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01387 - - cmos:111433746 581.637