Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g01387 | GCAATAGAGAGTGAAAAAAGAAGAAAAAAACAGACAAAAATGGCAAAGGGAAAACTTGTGTCTGAGAAGATTAAGCTCATTCTTGCCTTGATTGCTTTGCAATTCTGCTATGCAGGATTTCACATTGTGTCAAGAGTTGCTTTGAACATTGGTGTTAGTAAAGTCGTGTATCCGGTGTATCGAAACGCGATCGCTTTAGCTCTGTTGAGTCCTTTTGCTTATTTCCTTGAGAAGAATGAAAGGCCTCCTCTTACTTTTTCTTTGCTGTTTCAGTTCTTTCTTCTAGCTTTATTTGGAATCACTGCCAATCAAGGATTTTACCTCTTGGGGCTAAACTATGCATCTCCAACTTTTGCTTCTGCAATGCAAAACTCTGTTCCTGCTATTACAAGGAGAGATGGGTTGGCAAAGCTTTTGGGAACTATTGGGAGTGTTGGAGGAGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTTTTCACAACTTACTAACTCAAGGAAGTAGCATCTTGGGGATGGATGAACCTACACTTAAAGTGCAGAACTGGAGATGGGGCTGCATATACCTGCTAGGCCACTGCCTATCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTGTGTTGAAAAAATATCCAGCAAAGCTAACAATAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATTGCTGGCTTTGTGGAAACAGACTATCATGATCCTGTCTTTGTTGCTGTCTTCCAGCCTCTCCAAACTTTCCTAGTAGCCATCATGGCGTTTCTCATCCTCGGCGATCGGTTATTCTCCGGCGGGGTTATTGGAGCTGTTCTTATAACATTTGGTCTCTACTTAGTTTTGTGGGGAAAAAGTAAAGAAAAGGCATTGGAAGAAGAAGAAGACAAGTGTTTGAAACAGCCACTTTTGGAAGACCAAAAAGGGGACAAAGAAGACAAC | 960 | 41.98 | AIESEKRRKKQTKMAKGKLVSEKIKLILALIALQFCYAGFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERPPLTFSLLFQFFLLALFGITANQGFYLLGLNYASPTFASAMQNSVPAITRRDGLAKLLGTIGSVGGATVITLYRGPPLFHNLLTQGSSILGMDEPTLKVQNWRWGCIYLLGHCLSWAGWMVFQASVLKKYPAKLTITSYTCFFGLIQFLVIAGFVETDYHDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGVIGAVLITFGLYLVLWGKSKEKALEEEEDKCLKQPLLEDQKGDKEDN | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 11222436 | 11225120 | - | Cp4.1LG04g13900.1 | Cpe04g01387 | 468949 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g01387 | 320 | Pfam | EamA-like transporter family | 27 | 130 | IPR000620 | GO:0016020|GO:0016021 | |
Cpe04g01387 | 320 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 60 | 153 | - | - | |
Cpe04g01387 | 320 | PANTHER | WAT1-RELATED PROTEIN | 22 | 240 | IPR030184 | GO:0016021|GO:0022857 | |
Cpe04g01387 | 320 | PANTHER | WAT1-RELATED PROTEIN | 242 | 297 | - | - | |
Cpe04g01387 | 320 | PANTHER | WAT1-RELATED PROTEIN | 22 | 240 | - | - | |
Cpe04g01387 | 320 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 215 | 293 | - | - | |
Cpe04g01387 | 320 | PANTHER | WAT1-RELATED PROTEIN | 242 | 297 | IPR030184 | GO:0016021|GO:0022857 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g01387 | Cpe-Chr4:11222436 | Cpe11g00228 | Cpe-Chr11:1217523 | 1.60E-93 | dispersed | |
Cpe04g01387 | Cpe-Chr4:11222436 | Cpe07g00390 | Cpe-Chr7:2529138 | 9.01E-109 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g01387 | - | - | cmos:111433746 | 581.637 |