Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01423 ATGGATGCTCGGCGAGGATCCCGCGTCGTCAAACCCAAAGTTCGTCAGGTCGGATTCTTCACCCTCGACGCTCCAAACCCCCCCGGACGCTCCCTATCCGGTCCGGTCGGCTTTGGTCCTTCTCAACAATCCCTATCTCCTCCCACCGATCCCTTGTCTCCGGTCATGATTCCTCCTCCTCGTCATCTCTCCGATAACCTTGCCTCACGCTCTACTATTCTTCCTGTTCCGACTCCGGCCAATTGGAGGAATTCTGGTGATCAGATTCATGTTGGCAGTTATAACCCTTCCCAGACCCTGCTTGCGACTTCTCCTTCGAGTAGAATTTGGGACGATGAGTTGGAGATGTCCGAGGATTCTTCCACCTCCGTTCCGTATCGCCGGAGTGGTTCTGGGAAGATTGCGTCGAGCCTTCCTGGCCTTGGAGTCCACATGGCGGCTAAGTCGTCTGAGAATTCGCAGGCGGTGCCTCTCAGGACGCTGGGACCTAATAAGCCTGCTGGAGTTGCAGAGTTGAACTTTGCTCAGTTTTATTGTTTGAGGGAGTTTGGAGAAGAAAATAGAAAGGATCATGAAGAAAAGAAAGGACAGGAAAATAATGGAGGGGCGCCCACAGAGGTGCAAAATCAACCACCGCCATCAAGTTCAAAATCCCTGAAGGCAAAAACAACGAAGGCTGAAAGACGGGCTCTGCAGGAGGCACAACGAGCAGCAAAAGTTTCTGCAAAAGGTGAGACGAATAAGTCAGGTACTGCCCCTGGTAAAGCTGTGAAGCAGCCTTCGGCTATGAAAGATAGCACTGCTGCACCTTCGGTTGCATCTACTGATAAAAGAGGAGGTGATCGTACACTTGATAAGGAAAGGAAGAAAGATGCGCCCCATCCACGAATGCAGTTTGATGATAAAAATAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTCGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATATGAGCAGGGAACTCAGCTTCCTGATCTTTTGTCGAAGTTTTTCCAACTTGACACCATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGCTGTATTGCAATGCTTCATGCCTTTCAACAGGCCATCAAAGACTACTCAACTCCGCCTCAGAAATCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATGCAATTAGGCTAATAGCAAGTGGCCTAAAGTGTACCTACACTCATATAAATGCTATTTCTTATGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTGTCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTTCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGGTGATCCAGATGCTATTTCAAAGGTCCCAGGAAGGAAGGATGTTAATTATCTAGATAATTTAACTGCTAAAGAACAACTGCAATGTCTAAATTTAATGTATGATGCTACACCTTCAGATTATGTCTCAATGATTGTCACAGATTATGGCATGATCCCGCCTACAAGCATACCCGTGATCGTACGTGAGTATCGGAGAGAGCACCTATGGATTTAA 1740 46.38 MDARRGSRVVKPKVRQVGFFTLDAPNPPGRSLSGPVGFGPSQQSLSPPTDPLSPVMIPPPRHLSDNLASRSTILPVPTPANWRNSGDQIHVGSYNPSQTLLATSPSSRIWDDELEMSEDSSTSVPYRRSGSGKIASSLPGLGVHMAAKSSENSQAVPLRTLGPNKPAGVAELNFAQFYCLREFGEENRKDHEEKKGQENNGGAPTEVQNQPPPSSSKSLKAKTTKAERRALQEAQRAAKVSAKGETNKSGTAPGKAVKQPSAMKDSTAAPSVASTDKRGGDRTLDKERKKDAPHPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLLSKFFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNAIRLIASGLKCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPGRKDVNYLDNLTAKEQLQCLNLMYDATPSDYVSMIVTDYGMIPPTSIPVIVREYRREHLWI 579
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 11427317 11432717 - Cp4.1LG04g14300.1 Cpe04g01423 468985
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01423 579 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 426 579 - -
Cpe04g01423 579 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 429 - -
Cpe04g01423 579 MobiDBLite consensus disorder prediction 115 138 - -
Cpe04g01423 579 Pfam Initiation factor 2 subunit family 427 562 IPR000649 GO:0044237
Cpe04g01423 579 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 426 579 - -
Cpe04g01423 579 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 429 - -
Cpe04g01423 579 MobiDBLite consensus disorder prediction 278 306 - -
Cpe04g01423 579 MobiDBLite consensus disorder prediction 20 66 - -
Cpe04g01423 579 MobiDBLite consensus disorder prediction 36 50 - -
Cpe04g01423 579 MobiDBLite consensus disorder prediction 201 220 - -
Cpe04g01423 579 MobiDBLite consensus disorder prediction 188 306 - -
Cpe04g01423 579 SUPERFAMILY NagB/RpiA/CoA transferase-like 349 572 IPR037171 -
Cpe04g01423 579 Gene3D - 402 572 IPR042529 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01423 Cpe-Chr4:11427317 Cpe17g00426 Cpe-Chr17:3191706 5.27E-08 dispersed
Cpe04g01423 Cpe-Chr4:11427317 Cpe04g01424 Cpe-Chr4:11433515 7.10E-92 tandem
Cpe18g00739 Cpe-Chr18:7184511 Cpe04g01423 Cpe-Chr4:11427317 1.62E-98 wgd
Cpe18g00739 Cpe-Chr18:7184511 Cpe04g01423 Cpe-Chr4:11427317 1.62E-98 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01423 K03680 - csv:101215104 645.58