Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01424 ATGGATGCCCGCCGCGCCTCTCGCGTCGTCATCGACCCCAAAGTTCGGCAGGTCGGTTTCTTCACCCCCGACGCCCCGCACTCTCCGGGTGGGACCCTTCCCGCTCCGCCCGACTGCACTACTTCACTTCTCCCCGACTCTCCGACCAGTAATTCTTTGTCTCCTGTAATGATTCCGCCTCCACGTCACCCTTCCGACAACCTTTCCTCCCGGTCGGCTGTTCTGGGAAATTGGAGGCACCCTGAGGACCTGGTCCGTGTTGGGAGCCACAATCCCTCAGAAATGCTGCTCCGATCGTCACCGATGGCATCGTCTTCGACTCGAATTGCAGGTGAAGAATTGGAATTCTCGGAGGTTTCGTCGGCCTCCGTCTTGCTTCGGCGGAGTGGTTCGGGGAAGTTAGCGTCTAGCTGCCCTGGCGTTGGATTCTACATGGCGGCTAAGCGGGGGGATAATTTGAAGACAATGCCTGCCAATAGTGTGAGGACATTGGGAACTAACAAGCCTGCTGGAGCGACAGAAAAGATGGGAGGAGCATCCACAGAGGCCAAAGACCATCTTCCTTCAAGTTCGAAACCCTTGAAGGAAAAAACTACTAAGGCTGAAAGACGGGCTTTACAGGAGGCTCAGCGAGCAGCAAAAGTTTCTGCAAAAGGTGAGGCAAATAAGTCAGGTACTGCCTCTGGGGCAACAGCCGGTAAAGTTGGGAAACAGCCTTCAACAGTTAAAGGTCCTGCTACACCTTCAGTTGCATCTGCTGACAATAGAGGAGGTGATCGTATTGTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGTATGCAATTTGATGATAAACATCGGGTCGAAAGGGCTAAAAAGCGAGCTGTGTTTAATCAAACTGAAGCAAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATATGAGCAGGGGACTCAACTTCCTGATCTTGTGTCAAAGTTTTTCCAACTCGATACCATTCATCCTGCCATTTACAAGGTTGGTTTACAATACATGGCTGGAGATATATCTGGCGGTAATGCTCGTTGTATAGCAATGCTCCATGCATTTCAGCAGGCTATTAAAGACTACTCAACTCCGCCACAGAAATCTCTCGTTAGAGATTTAACTGCAAAAATTGGTGTCTATGTGTCATTCTTTAATGAATGCAGGCCATTGTCTGTTAGCATGGGTAATGCAATCAGATTTTTGAAAAATCGCATTGCCAAATTACCACCAAGTCTTCTAGAATCTGAGGCAAAAGCTACACTTTCCCTAGATATTAGTCGTTTTATCAATGAGAAGATAATGCTTGCTGATGAGGTCATAGTTAGACACGCTGCTACGAAGATCAGGGATGGAGACGTTCTTCTCACATATGGATCACCCTGTGTTGTAGAGATGCTTCTATTGTATGCTCATGATCTTGGGAAACAATTTCGTGTTGTAGTGGTAGATTCTCGACCAAAACTTGAGGGCCAAGCATTGCTGCGTAGGCTGATAGCAAAGGGCCTCAGTTGTACTTACACTCATATAAATGCTATTTCCTATGTGATGCGTGAAGTAGACCGAGTTTTTCTGGGTGCTGCTGCTGTATTAGCTAACGGAACTGTATATTCAAGAGTGGGGACTGCAGGTATTGCCATGGTTGCAGATGCATTTCATGTTCCAGTATTATTCTGCTGTGAAGCATATAAATTTCATGAAAGGGTACAACTTGATTCAATATGCTTTAATGAATTAGGCGACCCAGATGCTATATCAAAGATTTCAGGAAGGGCTGATATTAGTTATCTAGATAGTCTGACTTCTAAAGAACATTTGCAACTTCTGAATTTAATGTATGATGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGATCCCGCCAACAAGCGTGCCCGTGATCGTACGCGAGTATCGCAGAGAACACCTCCTATGGGTATGA 1968 46.39 MDARRASRVVIDPKVRQVGFFTPDAPHSPGGTLPAPPDCTTSLLPDSPTSNSLSPVMIPPPRHPSDNLSSRSAVLGNWRHPEDLVRVGSHNPSEMLLRSSPMASSSTRIAGEELEFSEVSSASVLLRRSGSGKLASSCPGVGFYMAAKRGDNLKTMPANSVRTLGTNKPAGATEKMGGASTEAKDHLPSSSKPLKEKTTKAERRALQEAQRAAKVSAKGEANKSGTASGATAGKVGKQPSTVKGPATPSVASADNRGGDRIVDKERKKDAPPPRMQFDDKHRVERAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDISGGNARCIAMLHAFQQAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIAKLPPSLLESEAKATLSLDISRFINEKIMLADEVIVRHAATKIRDGDVLLTYGSPCVVEMLLLYAHDLGKQFRVVVVDSRPKLEGQALLRRLIAKGLSCTYTHINAISYVMREVDRVFLGAAAVLANGTVYSRVGTAGIAMVADAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKISGRADISYLDSLTSKEHLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLLWV 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11433515 11440250 - Cp4.1LG04g14290.1 Cpe04g01424 468986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01424 655 Gene3D - 441 647 IPR042529 -
Cpe04g01424 655 SUPERFAMILY NagB/RpiA/CoA transferase-like 300 647 IPR037171 -
Cpe04g01424 655 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 653 - -
Cpe04g01424 655 MobiDBLite consensus disorder prediction 18 72 - -
Cpe04g01424 655 MobiDBLite consensus disorder prediction 188 209 - -
Cpe04g01424 655 MobiDBLite consensus disorder prediction 221 235 - -
Cpe04g01424 655 MobiDBLite consensus disorder prediction 156 276 - -
Cpe04g01424 655 Pfam Initiation factor 2 subunit family 345 637 IPR000649 GO:0044237
Cpe04g01424 655 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 653 - -
Cpe04g01424 655 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01424 Cpe-Chr4:11433515 Cpe18g00739 Cpe-Chr18:7184511 0 dispersed
Cpe04g01423 Cpe-Chr4:11427317 Cpe04g01424 Cpe-Chr4:11433515 7.10E-92 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01424 K03680 - csv:101215104 952.97