Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01448 ATGGAAGTTAATACCTACAGTGATCTATCACACAAAATTCTTTTTCAAATGGAATGCTGCTCGGCTCGACAGAAAAGAGTTGTACTCTTAGCACTTCTGATCTTTACAGCGTTCTATTCAACTGGGGCTTATGATCCATTGGATCCGAATGGAAACATAACAATCAAATGGGATGTAGTTTCTTGGACGCCAGATGGATATGTTGCTGTAGTGACAATGAACAATTTTCAGATGTACCGCCATATCAATGCACCAGGATGGACCCTGGGCTGGTCATGGGCCAAGAAAGAAGTAATATGGTCTATGGTGGGAGCTCAGACGACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAACGTACCTCATTGCTGCAAGAAAACCCCAATAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAGCAATTCTCCAATTGCTGCAAGGGTGGAGTGTTGGCTTCTTGGGGACAGGACCCAGTAGGTTCAGTCTCTGCCTTTCAGGTGAGTGTTGGACTAGCTGGCACTTCGAACAAAACGGTAAAGTTGCCGAAGAACTTCACTCTGCTCGGTCCAGGACCAGGCTACACATGTGGACCTGCAAAAGTTGTGCCTTCTACAGTCTTCCTTACTCCTGATCGCCGGCGGAAAACTCAAGCATTGATGACATGGAATGTAACCTGCACTTACTCACAGTTTCTGGCCTCTAAGAACCCAACTTGCTGCGTATCACTCTCGACTTTCTACAATGATACGATCACTTCTTGCCCAACCTGTGCATGTGGCTGCCAGAACAAACACAATTGTATAAAGAGTAACTCAAAGCTATTGCACAAGGACGGAATAAATACTCCTAAAAAGGATAATACGCCTTTACTACAGTGCACCCATCACATGTGTCCTGTTCGAGTACACTGGCACGTAAAAATTAATTACAAGGATTACTGGCGTGTGAAGGTTGCTGTAACCAACTTCAACTACAGGATGAACTATACGCTATGGACACTGGCAGTGCAGCATCCAAATCTGAATAATGTAACTCAAGTGTTCAGTTTTGACTACAAGCCCCTAGTTCCCTATGAATCCATTAATGATACTGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTACAATCTGAAGTACTAATGAAGAAGGATAAGGATACATTTACCTTCAAGCAGGGTTGGGCCTTTCCTAGAAAAGTATACTTCAACGGCGACGAATGTCAGATGCCACCACCAGAATCATACCCATATCTACCCAACTCTGCTCCTGAAGGCTCCAGTGCAGTTACCAAGTTGATCACCTCCTTGCTTTTGATAATCTGGCTTTTGTGGTGA 1371 43.91 MEVNTYSDLSHKILFQMECCSARQKRVVLLALLIFTAFYSTGAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPIVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTFYNDTITSCPTCACGCQNKHNCIKSNSKLLHKDGINTPKKDNTPLLQCTHHMCPVRVHWHVKINYKDYWRVKVAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLMKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPYLPNSAPEGSSAVTKLITSLLLIIWLLW 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11568796 11572373 + Cp4.1LG04g14420.1 Cpe04g01448 469010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01448 456 PANTHER PROTEIN COBRA 27 453 IPR006918 GO:0010215|GO:0031225
Cpe04g01448 456 PANTHER COBRA-LIKE PROTEIN 27 453 - -
Cpe04g01448 456 PIRSF COBRA 10 456 IPR006918 GO:0010215|GO:0031225
Cpe04g01448 456 Pfam COBRA-like protein 67 230 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01448 Cpe18g00714 CCT
Cpe04g01448 Cpe18g00714 ECH
Cpe04g01448 Cpe20g00086 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01399 Cpe-Chr2:12223631 Cpe04g01448 Cpe-Chr4:11568796 0 dispersed
Cpe04g01448 Cpe-Chr4:11568796 Cpe18g00714 Cpe-Chr18:7039262 1.29E-49 dispersed
Cpe04g01448 Cpe-Chr4:11568796 Cpe04g01449 Cpe-Chr4:11570360 0 tandem
Cpe18g00713 Cpe-Chr18:7036903 Cpe04g01448 Cpe-Chr4:11568796 0 wgd
Cpe20g00086 Cpe-Chr20:461896 Cpe04g01448 Cpe-Chr4:11568796 7.04E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01448 - - cmo:103494059 915.22