Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01456 ATGTTGAGAAGCTCAAAAGAAAAGGGTTTTGGAGGCAAAGAAGAAGGAATCAGTGATGAAAAATATGATATGGCTAAGGGATCAACGAGGTCAAGGCAGTGGTCAGGGTTTAGAAATCCAAGAATTGTGAGGGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTACTCGACGTCACGAAACTTGATATCGACAAGCTTCCGCCGCTCCAGATCCCGACCGGGTTGTCTCCGTTTCACCAACATATGCTCTTCCCTCAATATCATCATAATTCTAGTACTCTCCCTCCTCCTCCTCCTCCTCCGTTCGCCTTTGACATGAAGGATTCTTCGACGATGCATATCAGAGACGTCGTGAATCAAACGACGATGATCGAGAAATCGAAGTCGAAAGGGAAGTGGATTGATGGAGGTAATGATCAAGAAGTTGAAGAAGATTATAATGAGCAAATTATGATGAACAATTGTAATGCTTACAATTACAACACTTGTGATCATGATCATGATCATCAACATTCTAGTGGGGTTTTTCCATCACAAATTGAGGCTCAAACAAGTTCATCTTCATGTTCTTCACTTGTTTTCACTCCATATGCTTCATACATCACAAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCTCATACTTTGTCCAATCCCTTCATACCATCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATGCTGATAACAACAACGACGGCGGCTCCGGTAAAGACGGGGCGGCGTCTGGTAGCTCATAG 939 42.71 MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQHMLFPQYHHNSSTLPPPPPPPFAFDMKDSSTMHIRDVVNQTTMIEKSKSKGKWIDGGNDQEVEEDYNEQIMMNNCNAYNYNTCDHDHDHQHSSGVFPSQIEAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHADNNNDGGSGKDGAASGSS 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11614584 11615522 - Cp4.1LG04g14610.1 Cpe04g01456 469018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01456 312 MobiDBLite consensus disorder prediction 292 312 - -
Cpe04g01456 312 PANTHER TRANSCRIPTION FACTOR TCP5 28 311 - -
Cpe04g01456 312 ProSiteProfiles TCP domain profile. 51 109 IPR017887 -
Cpe04g01456 312 MobiDBLite consensus disorder prediction 1 32 - -
Cpe04g01456 312 Pfam TCP family transcription factor 51 149 IPR017887 -
Cpe04g01456 312 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 311 IPR005333 GO:0003700
Cpe04g01456 312 MobiDBLite consensus disorder prediction 1 27 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01456 Cpe18g00710 CCT
Cpe04g01456 Cpe20g00081 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01404 Cpe-Chr2:12257575 Cpe04g01456 Cpe-Chr4:11614584 4.73E-40 dispersed
Cpe04g01456 Cpe-Chr4:11614584 Cpe20g00081 Cpe-Chr20:421585 6.30E-41 dispersed
Cpe18g00710 Cpe-Chr18:7003353 Cpe04g01456 Cpe-Chr4:11614584 4.86E-132 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49435 PF03634 TCP 2.90E-23 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01456 - - mcha:111007241 383.645