Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g01456 | ATGTTGAGAAGCTCAAAAGAAAAGGGTTTTGGAGGCAAAGAAGAAGGAATCAGTGATGAAAAATATGATATGGCTAAGGGATCAACGAGGTCAAGGCAGTGGTCAGGGTTTAGAAATCCAAGAATTGTGAGGGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATAGAAGGATAAGGCTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTTAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTACTCGACGTCACGAAACTTGATATCGACAAGCTTCCGCCGCTCCAGATCCCGACCGGGTTGTCTCCGTTTCACCAACATATGCTCTTCCCTCAATATCATCATAATTCTAGTACTCTCCCTCCTCCTCCTCCTCCTCCGTTCGCCTTTGACATGAAGGATTCTTCGACGATGCATATCAGAGACGTCGTGAATCAAACGACGATGATCGAGAAATCGAAGTCGAAAGGGAAGTGGATTGATGGAGGTAATGATCAAGAAGTTGAAGAAGATTATAATGAGCAAATTATGATGAACAATTGTAATGCTTACAATTACAACACTTGTGATCATGATCATGATCATCAACATTCTAGTGGGGTTTTTCCATCACAAATTGAGGCTCAAACAAGTTCATCTTCATGTTCTTCACTTGTTTTCACTCCATATGCTTCATACATCACAAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCTCATACTTTGTCCAATCCCTTCATACCATCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATGCTGATAACAACAACGACGGCGGCTCCGGTAAAGACGGGGCGGCGTCTGGTAGCTCATAG | 939 | 42.71 | MLRSSKEKGFGGKEEGISDEKYDMAKGSTRSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGLSPFHQHMLFPQYHHNSSTLPPPPPPPFAFDMKDSSTMHIRDVVNQTTMIEKSKSKGKWIDGGNDQEVEEDYNEQIMMNNCNAYNYNTCDHDHDHQHSSGVFPSQIEAQTSSSSCSSLVFTPYASYITNPFESHIHFLSSNSHTLSNPFIPSSLHPFASQNLKPFPPNFNLKQLLHADNNNDGGSGKDGAASGSS | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 11614584 | 11615522 | - | Cp4.1LG04g14610.1 | Cpe04g01456 | 469018 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g01456 | 312 | MobiDBLite | consensus disorder prediction | 292 | 312 | - | - | |
Cpe04g01456 | 312 | PANTHER | TRANSCRIPTION FACTOR TCP5 | 28 | 311 | - | - | |
Cpe04g01456 | 312 | ProSiteProfiles | TCP domain profile. | 51 | 109 | IPR017887 | - | |
Cpe04g01456 | 312 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cpe04g01456 | 312 | Pfam | TCP family transcription factor | 51 | 149 | IPR017887 | - | |
Cpe04g01456 | 312 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 28 | 311 | IPR005333 | GO:0003700 | |
Cpe04g01456 | 312 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g01456 | Cpe18g00710 | CCT | |
Cpe04g01456 | Cpe20g00081 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01404 | Cpe-Chr2:12257575 | Cpe04g01456 | Cpe-Chr4:11614584 | 4.73E-40 | dispersed | |
Cpe04g01456 | Cpe-Chr4:11614584 | Cpe20g00081 | Cpe-Chr20:421585 | 6.30E-41 | dispersed | |
Cpe18g00710 | Cpe-Chr18:7003353 | Cpe04g01456 | Cpe-Chr4:11614584 | 4.86E-132 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49435 | PF03634 | TCP | 2.90E-23 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g01456 | - | - | mcha:111007241 | 383.645 |