Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01482 ATGGGGGGAGAATTCTGTACCACTCCATTCCCCTCCTCCCTTTTCCTCCTCTCTCTATTCCTCTTCTTCTCTCTCTCCTCTGCTATTCATCCCTCTTTTGTTCCCTTTTCCCCTCGCGACAATTACTTGATCGACTGCGGCTCGCCGGAGCAAACCCATCTCGACGACGGCCGGATTTTCAAATCCGATCGCGAATCGACTTCTCTCCTTGCCACTGAAGAAGACGTCCAAACCTCAATCGATTCCATTCCCGTAAACGCCTCTGTTTCGCCTCTGTCTTCTTGGGCATTGCCTCTCTTCCGCACCGCCAGAATCTTCCCCAGCGATTCCACTTACACTTTCTTCATTTCTCAGGCCGGCCGCCATTGGATTCGCCTCTATTTTTACCCTCTTCCTCACCCTAATTATAATCTTTCCGATTCCGTTTTCACTGTCACAACAGACAGTTTCGTCCTCCTCCACGATTTCTCAATCAAGGCCGACTCCAAAATCGTCTCCAAGGAGTATCTAATCAACATCACCACTGATCGATTCTCCCTTCAATTCAAACCAAAGAAGAATTCATCGGCGTTTATCAATGCCATTGAAATCGTCTCCGCCCCCGATCCTCTGTTTTCCGATTCCGCCACCTCTGTTTCTCCGGTAGGGTTTTTTAGCGGATTGTCGCATTTCGCTCTGGAAATCTGCTACCGTGTTAATGTCGGAGGGCCTCAGATTGTTCCTAGAAACGATACGTTGTCAAGAACGTGGGAAACAGATGATGCTTATAACAGATTCCCACAGGGTTCTAAGAACGTTTCTGTGGGTTTGAACTCGATTAAATACCCTGGAAACGACTTGACTCCATTGATTGCTCCATATTGGGTTTATGCAACGGCGGAGGATCTGCAAGATTCAAAAACAATGCAAGTAAGCTTTAATATGAGCTGGAGTTTTAATGTGGAGCAGAGCTATTCGTATTTGATCAGACTCCATTTCTGTGACATTGTGAGCTCCGTCCTCAACACTTTGTACTTCAATGTTTACATCAATGGGATGATGGGTATTGCAGATCTTGACCTCTCTCAGCTCACCGGCGATCTTTCAACTCCTTACTACAGAGACCTCGTCCTCAATGCCTCCTCCGTGGGTCCGTCGAATCTGAATTCAGGCCTTCAAGATGCAATCCTTAATGGTGTAGAGATCATGAAGATGAGCAACGATGCACAGAGCTTGGATGGGTTGTTTTCAGTGGATGGAAAATACATGGGAGGCTCAAGATTTAGCACCATGAAGATTGCAGCTATTGTGGCTTTGGGAATGGGAGTGATGGCGGTTCTGTTTCTTGGAGTAATGTTCTTGAGATGGCAGAAAAGGCCTCAAGGATGGGAGAAGAGGAAGAGCTTCTCTTCATGGCTTCTCCCATTGCATTCAAATCAATCCAGTTTCTTCTCTAGCAAAAGCAGCTCCAGAAAATCAAGCGTTTTTGGGTCTCGCCGGAGCAAGACTGGGTTCTCAGGAAACGACGATGAACCGGAAGGAAAAGGCAGTGCTTCCGCGAGTAATGATGCTTCTGAAGTGTCAGTGAGTGCTCCTCTGTTTGCAGAGGTTCGAAATTTTCAGGGAAGATGA 1611 46.99 MGGEFCTTPFPSSLFLLSLFLFFSLSSAIHPSFVPFSPRDNYLIDCGSPEQTHLDDGRIFKSDRESTSLLATEEDVQTSIDSIPVNASVSPLSSWALPLFRTARIFPSDSTYTFFISQAGRHWIRLYFYPLPHPNYNLSDSVFTVTTDSFVLLHDFSIKADSKIVSKEYLINITTDRFSLQFKPKKNSSAFINAIEIVSAPDPLFSDSATSVSPVGFFSGLSHFALEICYRVNVGGPQIVPRNDTLSRTWETDDAYNRFPQGSKNVSVGLNSIKYPGNDLTPLIAPYWVYATAEDLQDSKTMQVSFNMSWSFNVEQSYSYLIRLHFCDIVSSVLNTLYFNVYINGMMGIADLDLSQLTGDLSTPYYRDLVLNASSVGPSNLNSGLQDAILNGVEIMKMSNDAQSLDGLFSVDGKYMGGSRFSTMKIAAIVALGMGVMAVLFLGVMFLRWQKRPQGWEKRKSFSSWLLPLHSNQSSFFSSKSSSRKSSVFGSRRSKTGFSGNDDEPEGKGSASASNDASEVSVSAPLFAEVRNFQGR 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11775534 11778671 - Cp4.1LG04g14970.1 Cpe04g01482 469044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01482 536 Gene3D - 41 201 - -
Cpe04g01482 536 Gene3D - 224 401 - -
Cpe04g01482 536 Pfam Malectin-like domain 44 398 IPR024788 -
Cpe04g01482 536 MobiDBLite consensus disorder prediction 473 496 - -
Cpe04g01482 536 MobiDBLite consensus disorder prediction 473 520 - -
Cpe04g01482 536 PANTHER OS03G0759600 PROTEIN 31 473 - -
Cpe04g01482 536 PANTHER OS07G0166700 PROTEIN 31 473 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00720 Cpe-Chr2:4569646 Cpe04g01482 Cpe-Chr4:11775534 8.83E-106 dispersed
Cpe04g01482 Cpe-Chr4:11775534 Cpe17g00606 Cpe-Chr17:5017980 4.58E-141 dispersed
Cpe13g00978 Cpe-Chr13:8106211 Cpe04g01482 Cpe-Chr4:11775534 7.97E-35 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01482 - - cpep:111793369 951.814