Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01495 ATGGCCACCGTCACCACTCAAGCTTCCGCCGCCGTTTTCCGGCCATTCGCCTCCCGATCGAGGTTCCTTACTGGGTCTTTCGGTAAGCTCCACCGCGAGCTGTCGGTTAAACCGGTGGCTGCTTCGTCGCCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAGTGGTTGCCTGGTCTGCCATCTCCGGCGTACTTAACTGGCAGTCTTGCCGGCGACAACGGGTTCGACCCACTGGGTCTAGCGGAGGACCCAGAGAATTTGAGGTGGTTCGTGCAAGCGGAGCTCGTGAACGGGCGGTGGGCGATGCTGGGTGTGGCCGGAATGCTTCTGCCGGAGGTTTTCACGAAGATCGGAATCATCAACGCGCCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCGTCGTCTTCAACTCTGTTCGTGATCGAGTTCATCCTGTTCCATTACGTCGAAATCCGGAGATGGCAGGACATTAAAAACCCAGGAAGCGTGAACCAAGACCCCATTTTCAAGCAATACAGTTTGCCCCCAAATGAAGTGGGGTACCCTGGTGGCATTTTCAACCCCCTGAACTTCGCTCCCACTCTTGAAGCCAAGGAGAAGGAAATCGCCAATGGGAGGCTCGCAATGTTGGCGTTTTTGGGGTTCATCGTGCAACATAATGTGACTGGAAAGGGGCCATTTGAGAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTCCAGACATTCGGTGGCAACTAA 759 54.41 MATVTTQASAAVFRPFASRSRFLTGSFGKLHRELSVKPVAASSPSSFKVEAKKGEWLPGLPSPAYLTGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11844811 11846348 + Cp4.1LG04g14870.1 Cpe04g01495 469057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01495 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Cpe04g01495 252 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 252 - -
Cpe04g01495 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 252 IPR001344 GO:0009765|GO:0016020
Cpe04g01495 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
Cpe04g01495 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01495 Cpe18g00788 CCT
Cpe04g01495 Cpe18g00788 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01495 Cpe-Chr4:11844811 Cpe09g00591 Cpe-Chr9:4104797 3.69E-65 dispersed
Cpe07g00484 Cpe-Chr7:3138252 Cpe04g01495 Cpe-Chr4:11844811 1.88E-67 transposed
Cpe18g00788 Cpe-Chr18:7444269 Cpe04g01495 Cpe-Chr4:11844811 3.85E-179 wgd
Cpe02g01055 Cpe-Chr2:9696111 Cpe04g01495 Cpe-Chr4:11844811 1.59E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01495 K08910 - csv:101222701 475.322