Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g01500 | ATGGCGGAAGAGACAATCCCTCAACTCGGAGAAAACGGTCCGGAGGTAACCAACTCCTCCGCCGAAGATATGGAACTTGAAAGCACAGAGCCGAAAGTATCAGGTGGTGATTCTGATGCAAACGAGGCCGCTCCAGTAACGAATGGGGATGCTAATTCCAAGCGTGAGAGGGAGGAAGAAGGCGCCGGTGACTGTGTCGGAGAGGCGAAAAAGCTGAAGGTGGAGAAGTCGGTTGAAGAGGAAAGGCTTGAGAAGGTGGAAAGAGATGGGAAAGGCGAGGAAGAGCATGGTCCTGTGAGTTTAGGCCCGAAGAGCTTTGGATCATCGGTGGAGTTGTTCGATTACTTCTACAACTTTCTTCACTACTGGCCTGCCAACTTGAACGTGAACCAGTACGAGCTGATGGTGTTGCTGGATTTGATTAAGAAGGGACATGTCGAACCGGACAAAAAGATCGGCTGTGGTGTTCGCGCTTGCCAAATTCGATACCATCCCATGTGGAAAAGCAAGTGCTTCTTCCTGATTCGGGAGGATGGGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTGGATCATATCCTTCCACTGCCTGAAAACTTGAAGACGATATCTGATGCAAACAGGGCATTGGGTGGTGGTAAGCACCGCGGTGGAGGAAGAGGAGGAGGGGGTAGAACCTACAATTCTGCATTGAATAGTAACTGCAATTTTGGGTTTCAAGACAGCATTTTTGACGTTGTTCCATTGTTTGAGACATGCCCAAATGACTCCTTTTTGGTTCTAAAGGATATTGAACCCAATAACACCATTATATCAGAAGATGGTGGAGAAAATGAAAAGAAGGGATTAGAGAGGAAAGAAGGGAGGGGCAAAAGGAAGTGGTGCGGAGAAAGGAGCAGCAGCCCATCAAAAGGTTTGTCAAGAAAGACAATATCTGAGTACTTCTGGATGCCCATAACTCAGGCCGCTAAGGAATTGAATGTGGGGCTCACTCTGTTGAAGAAGAGGTGTAGAGAATTGGGCATAAGGAGATGGCCTCATAGGAAGTTGATGAGCCTCCAAACGCTAATCAAGAATGTGAAGGAGCTTGAGAAGGAAGATGGAGTGAAGCTAAGGCATGTATTGGAGATATTAGAGAATGAGAAGAAGTTAATGGAAGAGAGACCGGATTTACAGTTGGAGGACAACACGAAGAGGCTTAGACAAGCCTGCTTCAAGGCCAACTACAAGAAAAAAAGGCTGTCCGGAACAAACAACTCCTCAGCCACCAGGGTTCATCAGGATGATGATGAAGAAGAAGAAGATGAAGAAATGAAGTATCTGTTGGCGGATTGTTCATTTTCATTCACTGGTGGCAGCCTGTTGCTGTACTAA | 1374 | 46.94 | MAEETIPQLGENGPEVTNSSAEDMELESTEPKVSGGDSDANEAAPVTNGDANSKREREEEGAGDCVGEAKKLKVEKSVEEERLEKVERDGKGEEEHGPVSLGPKSFGSSVELFDYFYNFLHYWPANLNVNQYELMVLLDLIKKGHVEPDKKIGCGVRACQIRYHPMWKSKCFFLIREDGSADDFSFRKCVDHILPLPENLKTISDANRALGGGKHRGGGRGGGGRTYNSALNSNCNFGFQDSIFDVVPLFETCPNDSFLVLKDIEPNNTIISEDGGENEKKGLERKEGRGKRKWCGERSSSPSKGLSRKTISEYFWMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVKELEKEDGVKLRHVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKRLSGTNNSSATRVHQDDDEEEEDEEMKYLLADCSFSFTGGSLLLY | 457 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 11863618 | 11867305 | - | Cp4.1LG04g14960.1 | Cpe04g01500 | 469062 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g01500 | 457 | Coils | Coil | 69 | 89 | - | - | |
Cpe04g01500 | 457 | MobiDBLite | consensus disorder prediction | 270 | 304 | - | - | |
Cpe04g01500 | 457 | Pfam | Protein of unknown function (DUF3223) | 119 | 190 | - | - | |
Cpe04g01500 | 457 | Pfam | RWP-RK domain | 306 | 353 | IPR003035 | - | |
Cpe04g01500 | 457 | MobiDBLite | consensus disorder prediction | 274 | 298 | - | - | |
Cpe04g01500 | 457 | MobiDBLite | consensus disorder prediction | 1 | 101 | - | - | |
Cpe04g01500 | 457 | PANTHER | PROTEIN EMBRYO DEFECTIVE 514 | 18 | 225 | - | - | |
Cpe04g01500 | 457 | PANTHER | - | 18 | 225 | IPR044673 | - | |
Cpe04g01500 | 457 | MobiDBLite | consensus disorder prediction | 51 | 98 | - | - | |
Cpe04g01500 | 457 | ProSiteProfiles | RWP-RK domain profile. | 291 | 373 | IPR003035 | - | |
Cpe04g01500 | 457 | MobiDBLite | consensus disorder prediction | 414 | 433 | - | - | |
Cpe04g01500 | 457 | Gene3D | - | 95 | 193 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g01500 | Cpe18g00795 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g01500 | Cpe-Chr4:11863618 | Cpe06g00160 | Cpe-Chr6:870837 | 2.56E-09 | dispersed | |
Cpe02g00282 | Cpe-Chr2:1458353 | Cpe04g01500 | Cpe-Chr4:11863618 | 2.09E-08 | transposed | |
Cpe09g00019 | Cpe-Chr9:114286 | Cpe04g01500 | Cpe-Chr4:11863618 | 1.92E-32 | transposed | |
Cpe18g00795 | Cpe-Chr18:7465716 | Cpe04g01500 | Cpe-Chr4:11863618 | 3.48E-103 | transposed | |
Cpe18g00794 | Cpe-Chr18:7463360 | Cpe04g01500 | Cpe-Chr4:11863618 | 1.93E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49442 | PF11523 | DUF3223 | 2.80E-23 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g01500 | - | - | cmax:111471365 | 395.586 |