Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01513 ATGGAGGCTCAACCTTTGGCAACCACAGCTGATGCAGTTCAATCAGCTGGAGAAGATGAAGAACATGCTCCCAAACATAAGGTTCCCTTAATGGCTGACTTGGAGAAGCCTTCCATGGAGCCTCTTTCACTCGCATCTGCCTCTTCAACTTGGAAGGAAGAGGATCATGAGCATGAACAAAGACTAAAAATGGCGAAAGGTGAAATGAGGGAAGTGAAGGAAGAAAACCAGCGGCTAAAAAGGTGTTTAGATGAAATGATGAGGGATTACGAGAGCCTGAAAAGGCAATTCCATGATATGAGTACCATAAACAACGAGGCAGCTGAAGAAGTTGAGGACATGGTTTCACTCACATTGGGAAGATCCTCAACCGACCAAAACAAGAACACTTGCCCTGAAACAAAGCCAGATCTTCAAAACATTCAAAGTCCGGCCGACAGTGAACAAGGCAAGGAGGAAGATGCCGGACAGACTTGGCCGCCGGGTAAAGTGTTGAAGGGGTTGGCTGCGCCGCCGGCCGGAGAAGATGAAGTTTCTCAGCAGAATCCTCCGAAGAAGACCAGGGTTTGTGTGCGGGCTCGGTGTGATACGCCAACGGTGCAAAGGAGTGTTGATGATATTTCAATACTAATCACCACCTATGAAGGAACTCACAACCATCCTCTACCTGTGTCAGCCATGGCCATGGCTTCGACCACGTCGGCCGCCGCCTCAATGCTCCTCTCGGGTGCTTCCACCTCGACCTCTCGGCCAGGACTAAACCCTTCGGCGATCGGGACAGCGTCTGCAAATCTCCATGGAATGAACATGTACACAAATTCAAAGCAATTCTACTTGTCAAACTCTTCAATGCTATCTTCTTCTCTAAACCATCCCACAATCACCTTAGACCTCACTTCAAATCCTCCCTCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTTCCACAAAATCCCTTCAACTTATCCCCCAAAATATCCCTTCACCAGCCTTGATTTTGGGTCTTGGAATACTAATATCAACAAAAATGTATTAGGAATGTCATCAGATCTTGCTAAGCAATTCCCTCCCCATAGTAACATCTACCAAGCTTGCCTTCAACAATTTGCCAAACCTTCTACTCCTCCGCCCCTGCCTCTACCGGACACGATAGCAGCAGCAACCAAGGCAATTACGTCCGACCCGAGTTTCCAATCAGCATTGGCGGCTGCCCTCAGCTCGATCATCGGCGGCGGAAACGGGGGCGAGGCAGTTCAGGCAATGAGTAGCTATGTCCAAGCAGCACAGGGACAAGGAAGTATGGGGTTTCAGGCAGCTCCATCGTTGACATACTCCACATCTAAGAGTCCTTCATCTCCTGGTGACAGTAGAGACGATGATACCAAGTGA 1386 48.63 MEAQPLATTADAVQSAGEDEEHAPKHKVPLMADLEKPSMEPLSLASASSTWKEEDHEHEQRLKMAKGEMREVKEENQRLKRCLDEMMRDYESLKRQFHDMSTINNEAAEEVEDMVSLTLGRSSTDQNKNTCPETKPDLQNIQSPADSEQGKEEDAGQTWPPGKVLKGLAAPPAGEDEVSQQNPPKKTRVCVRARCDTPTVQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGASTSTSRPGLNPSAIGTASANLHGMNMYTNSKQFYLSNSSMLSSSLNHPTITLDLTSNPPSASSSSSSSSFHKIPSTYPPKYPFTSLDFGSWNTNINKNVLGMSSDLAKQFPPHSNIYQACLQQFAKPSTPPPLPLPDTIAAATKAITSDPSFQSALAAALSSIIGGGNGGEAVQAMSSYVQAAQGQGSMGFQAAPSLTYSTSKSPSSPGDSRDDDTK 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11927860 11931426 - Cp4.1LG04g15150.1 Cpe04g01513 469075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01513 461 MobiDBLite consensus disorder prediction 15 33 - -
Cpe04g01513 461 Coils Coil 55 96 - -
Cpe04g01513 461 MobiDBLite consensus disorder prediction 436 451 - -
Cpe04g01513 461 MobiDBLite consensus disorder prediction 120 146 - -
Cpe04g01513 461 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 200 451 - -
Cpe04g01513 461 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 43 200 - -
Cpe04g01513 461 MobiDBLite consensus disorder prediction 436 461 - -
Cpe04g01513 461 Gene3D WRKY domain 173 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe04g01513 461 MobiDBLite consensus disorder prediction 50 76 - -
Cpe04g01513 461 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 200 451 IPR044810 GO:0003700
Cpe04g01513 461 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 43 200 IPR044810 GO:0003700
Cpe04g01513 461 SUPERFAMILY WRKY DNA-binding domain 175 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe04g01513 461 MobiDBLite consensus disorder prediction 120 187 - -
Cpe04g01513 461 ProSiteProfiles WRKY domain profile. 174 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe04g01513 461 MobiDBLite consensus disorder prediction 1 76 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01513 Cpe18g00805 CCT
Cpe04g01513 Cpe18g00805 ECH
Cpe04g01513 Cpe20g00199 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01513 Cpe-Chr4:11927860 Cpe04g00720 Cpe-Chr4:7091741 1.98E-25 dispersed
Cpe18g00805 Cpe-Chr18:7509306 Cpe04g01513 Cpe-Chr4:11927860 8.27E-92 wgd
Cpe20g00199 Cpe-Chr20:1150014 Cpe04g01513 Cpe-Chr4:11927860 1.37E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01513 - - cmax:111471155 771.155