Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01520 ATGGAAGTTATAGGGTTTATGACCAACAAATGGGTTGCAACGGCCATCGGGATTTGGATCCAGTGCATCTGTGGTGCTTCCTACACCTTCAGCATCTATTCTTCGGCTCTCAAATCCACTCAGGGCTATGATCAATCAACCCTCGACACCGTTTCCGTTTTCAAGGACATCGGCGCCAACGCCGGCGTCATTTCTGGTTTTCTTTACTCCGCCGTTACTCCTGCCGCCCGTCGACGTAGCTCCCTTGGCCCATGGGTGGTTCACGCGGCGGGAGCGATTCAATGCTTCCTCGGTTATATTTTCATCTGGGCGGCGGTCTCTGGATTGATCGATCGGCCACCGGTGCCTGCGATGTGCTTCTTCATGTTCCTGGCTGCTCATGCGCAAACGTTTTTCAATACGGCGAACGTTGTGACTGGCGTTCACAATTTTGCGCACCATAGCGGGACTATTGTGGGCATCATGAAGGGATATCTTGGTCTTAGTGGAGCACTGCTAATCCAAGTTTATAACACGGCGTGCAATGGAGAACCAAGCAATTTTCTCCTCATGTTGGCTGTTTTCCCCACACTTCTATCCATCATGTTCATGTGGTTTGTTAGAATTGATAGAACAGAGTCTAGAAATGAGATGAAGCATTTGAACTCACTGTCTGCACTTGCTGTGATAGTTGCTTTTTACGTAATGGTCGTCATAATTTTCAACAACACTTTCTCCCTTTCATCATGGACACGTTTTGTTACATTCTCCATACTCTTGGTTCTCCTTGTTGCTCCTCTTGGAATCGCCATTAACGCTCAGAGGGAGGACCTTAGAATGTCATCTCCCTCATTTTTCACTGAAGAAAACCCTGTTCTTAACAAGCCCAAGTCAGCGAATGCAGAGGATTCTGTTGAATATCATGAGCTGCCCAGTGATGAGTTGCAGACAATGGCTGCTGCAAACTCCAGAGCTCCTCGAGCCATGAATGTCTTGGAAGCTTTACGCACTTTGAACTTCTGGCTTCTGTTTGTTGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACCATAAACAACATGAGCCAACTTGGCCAATCTCTTGGCTACACAGCAACAGAGACGAAAACATTTGTGTCCTTGTGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGTTACACCTCTGATTTTCTTCTACATTCATATGGCTGGGCGAGGCCATTGTTAATGGCTATCACTCTTCTGATAATGAGTGGTGGCCACATTGTAATCGCCTCTGGTTTCTCTGGAAATCTGTACGTGGGTTCAATTCTTGTTGGCATATGCTACGGCTCACAGTGGTCGCTGATGCCCACAATCACTTCAGAGATATTTGGTTTAGAGCATATGGGAACTATTTTCAACACCATAGCCATAGCCAGCCCTCTGGGGTCTTACATTTTCTCTGTTCGGGTCATCGGTTACATTTACGACAGAGAAGCTGCCGAAAAACATGGCTCCTGCTCCGGCACACACTGTTTTGTGGTATCTTTTCTGGTCATGGCCATTGTGGCTTTCTTGGGCTCTCTTGTTGCTGCTGCTCTCTTCTTTCGAACTAGGAGATTCTACCGACTGGCTTTGCAAAGAAGAGTGGAACGTCTCAGTTAA 1632 47.18 MEVIGFMTNKWVATAIGIWIQCICGASYTFSIYSSALKSTQGYDQSTLDTVSVFKDIGANAGVISGFLYSAVTPAARRRSSLGPWVVHAAGAIQCFLGYIFIWAAVSGLIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHHSGTIVGIMKGYLGLSGALLIQVYNTACNGEPSNFLLMLAVFPTLLSIMFMWFVRIDRTESRNEMKHLNSLSALAVIVAFYVMVVIIFNNTFSLSSWTRFVTFSILLVLLVAPLGIAINAQREDLRMSSPSFFTEENPVLNKPKSANAEDSVEYHELPSDELQTMAAANSRAPRAMNVLEALRTLNFWLLFVAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMAITLLIMSGGHIVIASGFSGNLYVGSILVGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAEKHGSCSGTHCFVVSFLVMAIVAFLGSLVAAALFFRTRRFYRLALQRRVERLS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11973089 11975639 + Cp4.1LG04g15300.1 Cpe04g01520 469082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01520 543 Pfam Major Facilitator Superfamily 335 528 IPR011701 GO:0022857|GO:0055085
Cpe04g01520 543 Gene3D MFS general substrate transporter like domains 278 523 IPR036259 -
Cpe04g01520 543 CDD MFS_Mch1p_like 10 516 - -
Cpe04g01520 543 Pfam Nodulin-like 10 263 IPR010658 -
Cpe04g01520 543 SUPERFAMILY MFS general substrate transporter 6 207 IPR036259 -
Cpe04g01520 543 PANTHER F25A4.25 PROTEIN 7 541 - -
Cpe04g01520 543 SUPERFAMILY MFS general substrate transporter 216 529 IPR036259 -
Cpe04g01520 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 541 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01520 Cpe-Chr4:11973089 Cpe04g01522 Cpe-Chr4:11979192 0 dispersed
Cpe04g01520 Cpe-Chr4:11973089 Cpe04g01521 Cpe-Chr4:11977251 0 tandem
Cpe18g00811 Cpe-Chr18:7561039 Cpe04g01520 Cpe-Chr4:11973089 0 wgd
Cpe04g00583 Cpe-Chr4:6224377 Cpe04g01520 Cpe-Chr4:11973089 1.59E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01520 - - csv:101216789 946.036