Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01521 ATGGAAGCTCCTCCGAGCAACAGATGGATTGCTACAGTTGCCAGCATTTGGATTCAATGCATTTGCGGTCCTTCCTACACCTTCGGCATTTACTCCTCCGCCCTCAAATCATCTCAAAACTACGATCAATCCACTCTCGACACTGTCTCCGTCTTCAAGGACATCGGCGCCTCCGCCGGAGTTCTTGCCGGCTTACTCTACTCCGCTGTCGTCTCCACGGATCGCCCCCGTCGCCCATGGATCGTCCTCTCCGTCGGAGCAATTCAATGCTTCCTTGGCTATATTTTCATTTGGGCTGCCGTCTCTGGTTTAATCCCTCGGCCGCCGGTGTCCGCGATGTGTTTGTTCATGTTCTTAGCAGTCCATGCCCAAGTCTTCTTCAACACGGCAAATGTCGTCACTGGCGTTCATAACTTCCAGCTCTACGGCGGCACCATCATCGGGATTCTAAAGGGATTTCTGGGTCTAAGTGGAGCAGTTCTGATCCAATTCTCTAACACATTCTACAACGGAGACCCAATAAATTATCTTCTGATGCTGGCGATTTTACCGGCGCTCACGACTGTTCTGCTCATGAGATTCGTCGTAATCCAAAAAACAGAGATCGGTAACGAATCGACCCATTTGAACTCCCTCTCAAAAATAGCTCTTATAATCTCTTGTTATCTCACAATTCTCATCATTTTGGACAACGTTTTAATTTTACCAACATGGGTTCGCTTATTTACTTTCGTTATACTCCTCATCCTTCTCGCTTCCCCTCTCGGAATCGCAAACAGAGCACAAACAGAGGACTCTGCTTCCAAAACCAAGCTTCAAAGCACAGACAATTCCGTTGAATATCATCAAATTCCCGGTGAAGAACAGAGAAATGATCAGCTAATGATGGTTACAAATGGAGAAATGAACGTAATCGAGGCAATTGGCACGGTGAATTTCTGGCTATTGTTTTCTGCGATGATGTGCGGAATGGGTTCTGGGTTAGCCACCATAAACAACATGAACCAACTGGGCCAGTCTTTGGGCTACAAAACAGTCGAAATCCACACATTCGTTTCACTGTGGAGCATTTGGAATTTCCTTGGGCGGTTAGGATCCGGCTATGCCTCTGATCTTCTCCTCCGGGAATTAGGCTGGGCGAGGCCATTATTAATGGCCGTCGCCTTGCTGACGATGAGCGTCGGCCATATCATCATAGCTTCAGGATCCTCCTGGAATTTGTACTTGGGGTCGGTGATTGTGGGGATTTGTTACGGCTCGCAATGGTCGCTAATGCCGGCAATTACGGCGGAGATTTTTGGAATAAGGCATATGGGTACCATTTACAATACGATCACGGTAGCCAGTCCGATTGGATCGTATGTTTTGTCTGTTAGAGTTATTGGGTATATTTACGACAGAGAAGCCTCTGCCGGAGACAACTCCTGCTCCGGCAAACACTGCTTTATGACGTCTTTTCTGATCATGGCAGCGGTGGCATTCTTGGGTTTTGTTGTTGCTTTTGCTCTGTTCCTTCGGACCAGGAGATTCTATCAACTTCTTGTGCAGAGACAGCTCAAGGATTAG 1566 47.57 MEAPPSNRWIATVASIWIQCICGPSYTFGIYSSALKSSQNYDQSTLDTVSVFKDIGASAGVLAGLLYSAVVSTDRPRRPWIVLSVGAIQCFLGYIFIWAAVSGLIPRPPVSAMCLFMFLAVHAQVFFNTANVVTGVHNFQLYGGTIIGILKGFLGLSGAVLIQFSNTFYNGDPINYLLMLAILPALTTVLLMRFVVIQKTEIGNESTHLNSLSKIALIISCYLTILIILDNVLILPTWVRLFTFVILLILLASPLGIANRAQTEDSASKTKLQSTDNSVEYHQIPGEEQRNDQLMMVTNGEMNVIEAIGTVNFWLLFSAMMCGMGSGLATINNMNQLGQSLGYKTVEIHTFVSLWSIWNFLGRLGSGYASDLLLRELGWARPLLMAVALLTMSVGHIIIASGSSWNLYLGSVIVGICYGSQWSLMPAITAEIFGIRHMGTIYNTITVASPIGSYVLSVRVIGYIYDREASAGDNSCSGKHCFMTSFLIMAAVAFLGFVVAFALFLRTRRFYQLLVQRQLKD 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11977251 11978883 + Cp4.1LG04g15310.1 Cpe04g01521 469083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01521 521 Pfam Nodulin-like 8 257 IPR010658 -
Cpe04g01521 521 PANTHER F25A4.25 PROTEIN 6 520 - -
Cpe04g01521 521 Gene3D MFS general substrate transporter like domains 304 512 IPR036259 -
Cpe04g01521 521 CDD MFS_Mch1p_like 8 496 - -
Cpe04g01521 521 SUPERFAMILY MFS general substrate transporter 294 509 IPR036259 -
Cpe04g01521 521 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 520 - -
Cpe04g01521 521 Pfam Major Facilitator Superfamily 315 508 IPR011701 GO:0022857|GO:0055085
Cpe04g01521 521 ProSiteProfiles Major facilitator superfamily (MFS) profile. 311 521 IPR020846 GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01521 Cpe-Chr4:11977251 Cpe18g00811 Cpe-Chr18:7561039 0 dispersed
Cpe04g01520 Cpe-Chr4:11973089 Cpe04g01521 Cpe-Chr4:11977251 0 tandem
Cpe04g01521 Cpe-Chr4:11977251 Cpe04g01522 Cpe-Chr4:11979192 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01521 - - csv:101216789 687.567