Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01593 ATGCCCGACCGAGGCTTGATCCTTCAGATCTTAGAGCCTTTAATGCCATCAAGAATGACTTTGGGCATTGACGCTCAACTCTCCTCCTCCCCATGCGACCTCGCCGGTGTCTTCTGCGAGCGCCGGCTTTCCAACAATGGCATTTATGTTTTGAGGATCACCAGGCTCATTTTCAAGTCCCAAGGTCTTACCGGTTCTCTTTCTCCGGCTATTGGGCGACTGACGGAGTTGGAACAGCTTACGGTTTCTGACAACCACCTCGTTGGCCACGTACCTGCACAGATTGATGACTGCCGGAAACTGGAAATTCTCCATCTGCAAAGCAACCAGTTTTCTGGCAAAGTTCCATCTGGGTTCTCCTCGTTGATTCGCCTTCGAGACATGGATCTTTCGTCCAATAAATTCTCGGGGAGTTTGGATTTCTTGAAGCATTTCCCCAACTTGGAAAGTCTTTCTATTGCCGATAATTACTTCACAGGGAAGATCCCAGCTTCAATTCGGTCTTTTCGCAATCTTCGAGTCTTCAACTTCTCTGGAAATCGCCTTCTCGAAAGCTCAGCCCCTGTCGTGAAAGGCGTTGAGCTCTACTCAGCAACCAGTGTCCTCAAGCGTTATAAGTTAGCTGAGAATTCCACTACGAAAGGTAAGCCCAGTGCCGCGGCCACAGCGCCAACTTCGAGTGCTCAAGCTTCATCTCCCGCAGCATCCTCTCATAAGCATCGGAAAAATAAAGCAGGAAAGGTATTAGGTTGGCTACTTGGATTGCTCGCAGGAGCAATTGCTGGAACTTTGTCAGGGTTTATCTTTTCTCTACTGTTTAAAATCATCATAGCAGTTATAAAAGGTGGAACCAAGAATTCGGGCCACTCAATCTATGCTCCTAAGCTAATAAAACGAGAGGATTTGGCTTTTCTAGAGAAAGACGATGTGCTTGCATCACTCGAGATGATTGGTAAAGGTGGATGTGGAGAAGTTTACAAGGCCGAATTACCAGAAAAAAGCGGGAGAATGTTTGCGATAAAGAAGATAGCTCAACCCCCGAAGGATGCGGCCGAGTTAGCTGACGAGGAAAGCAAGTTTATGAACAAGAAAATGCATCAGATCAAGTCAGAGATTAGAACTGTGGGTGAAATCCGGCATCGGAATCTTCTTCCTCTTGTAGCCCATGTTCTCCGTCCCGACTGCCACTACCTTGTGTATGAATTGATGAAGAATGGCAGCTTGCAAGACATGTTGAATCAGGTTTCGGCAGGAGCGAAAGAACTAGATTGGCTTACTCGGCACAAGATTGCTGTCGGAGTGGCATCTGGGCTGGAGTATCTTCACATGAACCATACCCCACGTATTATTCACAGGGATCTGAAGCCTGCAAATGTTTTGCTCGACGACAACATGGAAGCTCGAATTGCTGATTTTGGGCTGGCAAAAGTAATGCCAGATGCTCAAACTCACATGACGGCTTCCAATGTTGCAGGTACCGTAGGATACATCGCACCAGAGTATCATCAGACCTTAAAGTTCACTGATAAGTGCGATATATACGCCTTTGGGGTTCTGCTAGGGGTCTTGGTGATTGGGAAACTTCCATCTGATGAGTTTTTCCGGGACACGGATGAGATGAGTTTGGTCAAGTGGATGAGGAATGTTATGACTTCGGATAATCCTAGGAGAGCCATTGATCCGAAGCTCCTGGGAAATGGCTGGGAGGAGCAAATGCTCTTGGCTCTCAAAATTGCTTGTTTTTGCACCATGGATAATCCAAAAGAGAGGCCTAACAGTAAGGATGTCTGA 1791 46.96 MPDRGLILQILEPLMPSRMTLGIDAQLSSSPCDLAGVFCERRLSNNGIYVLRITRLIFKSQGLTGSLSPAIGRLTELEQLTVSDNHLVGHVPAQIDDCRKLEILHLQSNQFSGKVPSGFSSLIRLRDMDLSSNKFSGSLDFLKHFPNLESLSIADNYFTGKIPASIRSFRNLRVFNFSGNRLLESSAPVVKGVELYSATSVLKRYKLAENSTTKGKPSAAATAPTSSAQASSPAASSHKHRKNKAGKVLGWLLGLLAGAIAGTLSGFIFSLLFKIIIAVIKGGTKNSGHSIYAPKLIKREDLAFLEKDDVLASLEMIGKGGCGEVYKAELPEKSGRMFAIKKIAQPPKDAAELADEESKFMNKKMHQIKSEIRTVGEIRHRNLLPLVAHVLRPDCHYLVYELMKNGSLQDMLNQVSAGAKELDWLTRHKIAVGVASGLEYLHMNHTPRIIHRDLKPANVLLDDNMEARIADFGLAKVMPDAQTHMTASNVAGTVGYIAPEYHQTLKFTDKCDIYAFGVLLGVLVIGKLPSDEFFRDTDEMSLVKWMRNVMTSDNPRRAIDPKLLGNGWEEQMLLALKIACFCTMDNPKERPNSKDV 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12403043 12404833 + Cp4.1LG04g15900.1 Cpe04g01593 469155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01593 596 MobiDBLite consensus disorder prediction 213 241 - -
Cpe04g01593 596 MobiDBLite consensus disorder prediction 213 236 - -
Cpe04g01593 596 Pfam Leucine rich repeat 76 135 IPR001611 GO:0005515
Cpe04g01593 596 SMART serkin_6 311 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01593 596 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 596 - -
Cpe04g01593 596 Gene3D Transferase(Phosphotransferase) domain 1 407 596 - -
Cpe04g01593 596 Gene3D Phosphorylase Kinase; domain 1 311 406 - -
Cpe04g01593 596 ProSiteProfiles Protein kinase domain profile. 311 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g01593 596 SUPERFAMILY L domain-like 27 185 - -
Cpe04g01593 596 Gene3D Ribonuclease Inhibitor 15 140 IPR032675 -
Cpe04g01593 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Cpe04g01593 596 Gene3D Ribonuclease Inhibitor 141 222 IPR032675 -
Cpe04g01593 596 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 14 596 - -
Cpe04g01593 596 SUPERFAMILY Protein kinase-like (PK-like) 313 596 IPR011009 -
Cpe04g01593 596 Pfam Protein kinase domain 314 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01593 Cpe18g00880 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01593 Cpe-Chr4:12403043 Cpe05g00090 Cpe-Chr5:430776 4.51E-07 dispersed
Cpe18g00880 Cpe-Chr18:8002077 Cpe04g01593 Cpe-Chr4:12403043 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62382 PF00069 Pkinase 6.30E-42 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01593 - - cpep:111793199 1072.0