Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g01611 ATGCAAGACTTCCTTCTTCTTTCCCTCTCTCTCTCGGCTTTCTTTCTTATTTATGTTTTCATTTATAAATTCCACCGCTTTTCTACTAACCGCTCTTCCCCTCCCTCTTACCCTTTCATCGGCTGCTTCATCTCCTTCTTCAAAAACCGGCGCCGCCTTCTCTCCTGGTACACCCACCTGCTTTCCAACTCTCCGTCCTTGACCATTGTGGTGCACCGCCTCGGTTCCAGGCGGACCGTCGTCACGGCCAACCCAGCCAACGTCGAGTACATGCTCAAGACTAATTTTCTTAATTACCCTAAAGGAAAGCCCTTCACTGATGTACTCGGCGATCTCCTCGGCTGCGGCATTTTCAACGTCGACGGCGAGTTGTGGTCCACCCAGCGCAAGCTCGCTAGCCATGAATTTTCTGCTAAGTCTTTAAGGGAATTTGTGGTTAAGACGCTTGAAGATGAAGTTCATCTCCGTTTGATTCCGTTGCTCCGGAACGCTGCCCGGACTAACGCCGTCTTGGATTTGCAAGATGTTCTTGGTAGACTCGCTTTTGACACCATTTGTAAGATGACTTTAGGAACTGAGGAGCAATGTTTGGACCTGTCGCGCCCAGTTCCAGCAATAGTAAATGCATTCGATATGGCTACGGGGATCAGCGCCAAGCGGGCAATAGCGCCACTCTCTCTGGCGTGGAAGGCCAAGCGGCTGTTCAACATCGGCTCCGAGAAGCGGCTCAAAGAAGCCGTCCAAATGGTCCACTCATGGGTCTCCCACATCATTCGCAACAAAAATCTCGACAACAATAAAGACAGCGATTTGTTATCTCGGCTGTTATCCGCCGGCCACGGCGAGGAAGTCGTCCGAGACATGGTCGTCAGCTTCATAATGGCTGGCCGTGACACCACTTCCGCCGCCATGACGTGGCTCTTCTGGTTGCTGACAAAGCATCCCAAAGTGGAACAGACCCTTATGGACGAAGTGGCTTCCTTGACCAACAATTACCAAACGGCGTCGTTGGGTTACGGCTACGAAGAATTAAAGGGCATGAAGTATTTGAAGGCGTGTTTGTGTGAGTCCATGCGGCTTTACCCACCGGTGGCTTGGGATTCAAAGCACGCAGCGGCGGCGGACATTCTGCCGGATGGAACTCCGGTGAGGAAAGGGGACAGAGTGACGTATTTTCCGTACGGAATGGGGCGGATGGAGGAGCTGTGGGGTCCGGAGCGGGAGGAGTTCAAACCGGAACGGTGGTTTGAAAAGGGGGAGGTGAAAGCGGTGAGTCCGTTTAAGTTCCCGGTGTTCCAAGGCGGACCGAGAATGTGCTTGGGAAAGGAAATGGCGTTCATTCAGATGAAATACGTGGTAGCCACGGTTTTGAAGCGGTTTGAGTTTAGAGCGGTGAGTGAAAGTGAACCGGTTTTTGTGCCGTTGTTGACAGCTCACATGGCAGGTGGATTACAGGTTTATGTTAGAGAAAGAAGAGGACAAAAGTGA 1488 51.68 MQDFLLLSLSLSAFFLIYVFIYKFHRFSTNRSSPPSYPFIGCFISFFKNRRRLLSWYTHLLSNSPSLTIVVHRLGSRRTVVTANPANVEYMLKTNFLNYPKGKPFTDVLGDLLGCGIFNVDGELWSTQRKLASHEFSAKSLREFVVKTLEDEVHLRLIPLLRNAARTNAVLDLQDVLGRLAFDTICKMTLGTEEQCLDLSRPVPAIVNAFDMATGISAKRAIAPLSLAWKAKRLFNIGSEKRLKEAVQMVHSWVSHIIRNKNLDNNKDSDLLSRLLSAGHGEEVVRDMVVSFIMAGRDTTSAAMTWLFWLLTKHPKVEQTLMDEVASLTNNYQTASLGYGYEELKGMKYLKACLCESMRLYPPVAWDSKHAAAADILPDGTPVRKGDRVTYFPYGMGRMEELWGPEREEFKPERWFEKGEVKAVSPFKFPVFQGGPRMCLGKEMAFIQMKYVVATVLKRFEFRAVSESEPVFVPLLTAHMAGGLQVYVRERRGQK 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12527159 12528735 - Cp4.1LG04g16130.1 Cpe04g01611 469173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g01611 495 SUPERFAMILY Cytochrome P450 33 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 Pfam Cytochrome P450 34 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 Gene3D Cytochrome P450 17 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 PANTHER CYTOCHROME P450 21 489 - -
Cpe04g01611 495 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g01611 495 PANTHER CYTOCHROME P450 94B3 21 489 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01611 Cpe-Chr4:12527159 Cpe20g00706 Cpe-Chr20:5867387 6.86E-142 dispersed
Cpe05g00048 Cpe-Chr5:255317 Cpe04g01611 Cpe-Chr4:12527159 1.36E-152 transposed
Cpe19g00440 Cpe-Chr19:3917919 Cpe04g01611 Cpe-Chr4:12527159 1.08E-31 transposed
Cpe18g00897 Cpe-Chr18:8079669 Cpe04g01611 Cpe-Chr4:12527159 0 wgd
Cpe03g00622 Cpe-Chr3:3717285 Cpe04g01611 Cpe-Chr4:12527159 0 wgd
Cpe04g00490 Cpe-Chr4:5518571 Cpe04g01611 Cpe-Chr4:12527159 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g01611 K20665 - csv:101202989 778.474